RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 PXMP2Q9NR77 195 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZNF275Q9NSD4 429 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 NUDT15Q9NV35 164 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 EHFQ9NZC4 300 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 NUP50Q9UKX7 468 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 STAP1Q9ULZ2 295 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 VSIG4Q9Y279 399 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 C15orf41Q9Y2V0 281 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 AK6Q9Y3D8 172 aaKnown RBP1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 RHBDD3Q9Y3P4 386 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 OARD1Q9Y530 152 aa1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZNF646O15015 1829 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P35-201ENST00000503360 KBTBD11-OT1A0A1B0GTJ5 212 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 A0A1W2PPV9 198 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 FAM168BA1KXE4 195 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 A8MUA0 341 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 PDZK1P1A8MUH7 402 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 SERPINE3A8MV23 424 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 A8MXQ7 604 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 E9PLD3 99 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 DLGAP1O14490 977 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 PSTPIP1O43586 416 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 KDELR3O43731 214 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 EFNA2O43921 213 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 UGT2B17O75795 530 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 FGFR1OPO95684 399 aaKnown RBP1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 CA1P00915 261 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 IGKV3-15P01624 115 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 IGHG4P01861 327 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 GAPDHP04406 335 aaKnown RBP1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 GIG44P09565 113 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 KLK2P20151 261 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 KITLGP21583 273 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 HMGB2P26583 209 aaKnown RBP1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 GCAP28676 217 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 GNA11P29992 359 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 PRKAR2BP31323 418 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 IFNA8P32881 189 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 MAP3K8P41279 467 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 GPR4P46093 362 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 MRPL19P49406 292 aaKnown RBP1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 MEOX2P50222 304 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 CLDN18P56856 261 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 RPL8P62917 257 aaKnown RBP1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 XIAPP98170 497 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 CDK16Q00536 496 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 OC90Q02509 493 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZNF154Q13106 437 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 XRCC4Q13426 336 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 COTL1Q14019 142 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 DPYSL3Q14195 570 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 ITIH4Q14624 930 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 KCNJ11Q14654 390 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 SLC5A12Q1EHB4 618 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 SLC25A52Q3SY17 297 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 TP53I3Q53FA7 332 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 XKR4Q5GH76 650 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 FAM120AOSQ5T036 256 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 C1orf220Q5T0J3 134 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 OLFML2AQ68BL7 652 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 CLEC6AQ6EIG7 209 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 UFSP1Q6NVU6 142 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 ULK3Q6PHR2 472 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 LRRC31Q6UY01 552 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 HSDL2Q6YN16 418 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 TRMT10CQ7L0Y3 403 aaKnown RBP1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 COPS6Q7L5N1 327 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 SLC16A14Q7RTX9 510 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 MMAAQ8IVH4 418 aaKnown RBP1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 GPR65Q8IYL9 337 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 OR2T33Q8NG76 320 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 OR4A4PQ8NGN8 299 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 OR9G4Q8NGQ1 327 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 OR9A4Q8NGU2 314 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 ANGPTL6Q8NI99 470 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 DDI1Q8WTU0 396 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 TRUB1Q8WWH5 349 aaKnown RBP1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 IL1F10Q8WWZ1 152 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 TOP1MTQ969P6 601 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 UBE2E3Q969T4 207 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 C8orf44Q96CB5 159 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 ASB9Q96DX5 294 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 TMEM80Q96HE8 168 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 VSIG2Q96IQ7 327 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 PLEKHA8Q96JA3 519 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 JSRP1Q96MG2 331 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 GLT1D1Q96MS3 346 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZNF641Q96N77 438 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 CATSPER2Q96P56 530 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 MBOAT4Q96T53 435 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 FMO2Q99518 471 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 MAPKAP1Q9BPZ7 522 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 ACBD6Q9BR61 282 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 SLC35A5Q9BS91 424 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 PAXXQ9BUH6 204 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 RAB34Q9BZG1 259 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 TM6SF2Q9BZW4 377 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 NIPAL2Q9H841 368 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 DYRK4Q9NR20 520 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 TNFRSF19Q9NS68 423 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms