RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 CCNL2Q96S94 520 aaPredicted RBP10.56□□□□□ -0.72
USP46-204ENST00000503060 DUSP23Q9BVJ7 150 aa10.56□□□□□ -0.72
USP46-204ENST00000503060 VN1R1Q9GZP7 353 aa10.56□□□□□ -0.72
USP46-204ENST00000503060 OR51V1Q9H2C8 321 aa10.56□□□□□ -0.72
USP46-204ENST00000503060 SMURF1Q9HCE7 757 aa10.56□□□□□ -0.72
USP46-204ENST00000503060 EXOSC3Q9NQT5 275 aaKnown RBP10.56□□□□□ -0.72
USP46-204ENST00000503060 ATXN7L1Q9ULK2 861 aaPredicted RBP10.56□□□□□ -0.72
USP46-204ENST00000503060 UNC13CQ8NB66 2214 aa10.56□□□□□ -0.72
USP46-204ENST00000503060 ADAMTS20P59510 1910 aa10.56□□□□□ -0.72
USP46-204ENST00000503060 ARID1BQ8NFD5 2236 aaPredicted RBP10.55□□□□□ -0.72
USP46-204ENST00000503060 SAGE2PA6NJ88 616 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 A8MXE2 369 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 CTDSP2O14595 271 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 TOX3O15405 576 aaPredicted RBP10.55□□□□□ -0.72
USP46-204ENST00000503060 IFNGP01579 166 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 PNLIPP16233 465 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 PRKCAP17252 672 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 SLC2A5P22732 501 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 ETV6P41212 452 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 CASP6P55212 293 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 RPS7P62081 194 aaKnown RBP10.55□□□□□ -0.72
USP46-204ENST00000503060 EBPQ15125 230 aaKnown RBP10.55□□□□□ -0.72
USP46-204ENST00000503060 NR0B2Q15466 257 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 C9orf40Q8IXQ3 194 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 PRR22Q8IZ63 422 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 PARP16Q8N5Y8 322 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 CYB561A3Q8NBI2 242 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 OR5M3Q8NGP4 307 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 LIPHQ8WWY8 451 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 ERMAPQ96PL5 475 aaPredicted RBP10.55□□□□□ -0.72
USP46-204ENST00000503060 ADOQ96SZ5 270 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 TEAD3Q99594 435 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 RERGLQ9H628 205 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 CHRNA9Q9UGM1 479 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 MUTYHQ9UIF7 546 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 ZNF175Q9Y473 711 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 CABIN1Q9Y6J0 2220 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 CPED1A4D0V7 1026 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 LRRN3E7EW58 273 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 GTPBP1O00178 669 aaKnown RBP10.55□□□□□ -0.72
USP46-204ENST00000503060 TO15178 435 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 ZNF264O43296 627 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 REM1O75628 298 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 UPK1BO75841 260 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 CCR4P51679 360 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 FABP5Q01469 135 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 DBPQ10586 325 aaPredicted RBP10.55□□□□□ -0.72
USP46-204ENST00000503060 CCDC58Q4VC31 144 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 HLA-DQA1Q5Y7H0 255 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 GUSBP11Q6P575 273 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 CD200R1LQ6Q8B3 271 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 TMPRSS11AQ6ZMR5 421 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 CCDC190Q86UF4 302 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 WDR5BQ86VZ2 330 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 KLBQ86Z14 1044 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 LRRC17Q8N6Y2 441 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 MINDY2Q8NBR6 621 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 RNF31Q96EP0 1072 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 FAM71F1Q96KD3 344 aaPredicted RBP10.55□□□□□ -0.72
USP46-204ENST00000503060 KCTD7Q96MP8 289 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 SLC19A3Q9BZV2 496 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 NRSN2Q9GZP1 204 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 LRRN3Q9H3W5 708 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 FOXD3Q9UJU5 478 aaPredicted RBP10.55□□□□□ -0.72
USP46-204ENST00000503060 SRPK3Q9UPE1 567 aa10.55□□□□□ -0.72
USP46-204ENST00000503060 RP1P56715 2156 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 COL5A1P20908 1838 aaPredicted RBP10.54□□□□□ -0.72
USP46-204ENST00000503060 IGKV1D-42A0A075B6H8 117 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 LY6G6EA0A0G2JKS1 128 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 TRDV1A0A1B0GX56 115 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 ELOA3DA6NLF2 546 aaPredicted RBP10.54□□□□□ -0.72
USP46-204ENST00000503060 ICOSLGO75144 302 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 OR7A10O76100 309 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 DLGAP3O95886 979 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 CLEC2LP0C7M8 214 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 PNMTP11086 282 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 LCN1P31025 176 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 FGF9P31371 208 aaPredicted RBP10.54□□□□□ -0.72
USP46-204ENST00000503060 SLC16A1P53985 500 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 MXD1Q05195 221 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 ELOA3BQ3SY89 546 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 DESI1Q6ICB0 168 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 CBLN3Q6UW01 205 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 COX15Q7KZN9 410 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 ATG4DQ86TL0 474 aaPredicted RBP10.54□□□□□ -0.72
USP46-204ENST00000503060 PLPP5Q8NEB5 264 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 ELOA3Q8NG57 546 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 OR1N1Q8NGS0 311 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 SAP25Q8TEE9 199 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 SLC25A46Q96AG3 418 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 DMRTA2Q96SC8 542 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 ALG8Q9BVK2 526 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 FSCN3Q9NQT6 498 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 ABCB10Q9NRK6 738 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 INPP5EQ9NRR6 644 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 SLC22A11Q9NSA0 550 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 COPS7AQ9UBW8 275 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 CTSFQ9UBX1 484 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 SUSD2Q9UGT4 822 aa10.54□□□□□ -0.72
USP46-204ENST00000503060 PILRBQ9UKJ0 227 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms