RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 BSGP35613 385 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 F2RL1P55085 397 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 PPP2CBP62714 309 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 PPP2CAP67775 309 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 MORN1Q5T089 497 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 CDK20Q8IZL9 346 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 ADAMTS15Q8TE58 950 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 SGK3Q96BR1 496 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 ALG14Q96F25 216 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 SELENOIQ9C0D9 397 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 CWH43Q9H720 699 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 ZNF275Q9NSD4 429 aaPredicted RBP12□□□□□ -0.49
GAPVD1-220ENST00000497580 WDR90Q96KV7 1748 aa12□□□□□ -0.49
GAPVD1-220ENST00000497580 hCG_1809904A0A1W2PP81 198 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 A0A1W2PR64 198 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 A0A1W2PRV1 198 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 C5orf51A6NDU8 294 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 WASH3PC4AMC7 463 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 HLA-AP01891 365 aaKnown RBP11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 DCNP07585 359 aaKnown RBP11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 F3P13726 295 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 FXYD6P3P58550 94 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 NKAPLQ5M9Q1 402 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 SSX9Q7RTT3 188 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 GJD3Q8N144 294 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 HAVCR1Q96D42 359 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 TGIF2Q9GZN2 237 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 GTF2A1LQ9UNN4 478 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 GGT3PA6NGU5 568 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 M0R036 132 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 OLFM2O95897 454 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 ZNF44P15621 663 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 MAPK3P27361 379 aaPredicted RBP11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 GPR143P51810 404 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 DUSP2Q05923 314 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 GXYLT1Q4G148 440 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 C11orf87Q6NUJ2 197 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 NUDT18Q6ZVK8 323 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 ETFBKMTQ8IXQ9 262 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 OR5AR1Q8NGP9 310 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 OR9A2Q8NGT5 310 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 CA5BP1Q8WTZ4 195 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 TCTEX1D2Q8WW35 142 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 RGP1Q92546 391 aaPredicted RBP11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 CHMP1AQ9HD42 196 aaPredicted RBP11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 ZDHHC4Q9NPG8 344 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 SLC27A6Q9Y2P4 619 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 COL4A4P53420 1690 aaPredicted RBP11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 CENPVL1A0A0U1RR11 272 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 ST8SIA5O15466 376 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 RAD1O60671 282 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 IGHV2-70P01814 119 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 EPCAMP16422 314 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 CASRP41180 1078 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 RAB2AP61019 212 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 RPS11P62280 158 aaKnown RBP eCLIP11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 SKP1P63208 163 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 ECH1Q13011 328 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 LY6G6FQ5SQ64 297 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 ENPP7Q6UWV6 458 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 ZNF627Q7L945 461 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 OR51D1Q8NGF3 324 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 LAT2Q9GZY6 243 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 MYOFQ9NZM1 2061 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 OTOFQ9HC10 1997 aa11.99□□□□□ -0.49
GAPVD1-220ENST00000497580 ASCC3Q8N3C0 2202 aaKnown RBP11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 SLC5A10A0PJK1 596 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 IMPA2O14732 288 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 NDUFS4O43181 175 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 AKAIN1P0CW23 69 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 PRF1P14222 555 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 PGAM2P15259 253 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 PRKCZQ05513 592 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 C22orf39Q6P5X5 142 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 MISPQ8IVT2 679 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 NUP43Q8NFH3 380 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 OR4A4PQ8NGN8 299 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 LMF1Q96S06 567 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 ANKRD10Q9NXR5 420 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 EPHA6Q9UF33 1036 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 A0A0A6YYC8 382 aaPredicted RBP11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 A0A1B0GTH9 108 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 I3L1I5 382 aaPredicted RBP11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 BHLHE40O14503 412 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 GABRR2P28476 465 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 AVPR2P30518 371 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 CD80P33681 288 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 HTRA4P83105 476 aaPredicted RBP11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 POU4F2Q12837 409 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 C3orf33Q6P1S2 294 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 WDR88Q6ZMY6 472 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 C12orf40Q86WS4 652 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 CCDC107Q8WV48 283 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 TMEM239Q8WW34 195 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 DCUN1D4Q92564 292 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 MEGF10Q96KG7 1140 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 AIF1LQ9BQI0 150 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 ZNF350Q9GZX5 532 aa11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 PARP12Q9H0J9 701 aaKnown RBP11.98□□□□□ -0.49
GAPVD1-220ENST00000497580 CMC2Q9NRP2 79 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms