RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 LYPD3O95274 346 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 BGLAPP02818 100 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 THY1P04216 161 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 IGHV1-2P23083 117 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 AHCYP23526 432 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 YAP1P46937 504 aaKnown RBP14.45□□□□□ -0.1
SF3A1-209ENST00000496189 P2RY4P51582 365 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 CLDN17P56750 224 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 PUDPQ08623 228 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 TRAM2Q15035 370 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 PPA1Q15181 289 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 KLHL24Q6TFL4 600 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 OFCC1Q8IZS5 231 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 ZNF433Q8N7K0 673 aaPredicted RBP14.45□□□□□ -0.1
SF3A1-209ENST00000496189 OR5J2Q8NH18 312 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 TMEM239Q8WW34 195 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 ZNF385AQ96PM9 386 aaKnown RBP14.45□□□□□ -0.1
SF3A1-209ENST00000496189 ZNF426Q9BUY5 554 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 FKRPQ9H9S5 495 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 MRPL39Q9NYK5 338 aaKnown RBP14.45□□□□□ -0.1
SF3A1-209ENST00000496189 ST6GALNAC2Q9UJ37 374 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 MED31Q9Y3C7 131 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 NOX1Q9Y5S8 564 aa14.45□□□□□ -0.1
SF3A1-209ENST00000496189 DEFB108AA8MXU0 73 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 FZD7O75084 574 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 CH25HO95992 272 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 RAF1P04049 648 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 FABP3P05413 133 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 THBDP07204 575 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 ADORA3P0DMS8 318 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 HOXB6P17509 224 aaKnown RBP14.44□□□□□ -0.1
SF3A1-209ENST00000496189 ATP6V1B2P21281 511 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 MPGP29372 298 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 SMIM11AP58511 58 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 MS4A2Q01362 244 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 TAB1Q15750 504 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 FAM98BQ52LJ0 330 aaKnown RBP14.44□□□□□ -0.1
SF3A1-209ENST00000496189 C1QTNF12Q5T7M4 302 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 TSPO2Q5TGU0 170 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 HMBOX1Q6NT76 420 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 PGM2L1Q6PCE3 622 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 KLHL17Q6TDP4 642 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 RRM2BQ7LG56 351 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 TSPYL5Q86VY4 417 aaPredicted RBP14.44□□□□□ -0.1
SF3A1-209ENST00000496189 KDM8Q8N371 416 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 GPR137CQ8N3F9 429 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 C17orf78Q8N4C9 275 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 FAM86B1Q8N7N1 296 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 PIK3C3Q8NEB9 887 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 C1orf162Q8NEQ5 155 aaPredicted RBP14.44□□□□□ -0.1
SF3A1-209ENST00000496189 PLPPR2Q96GM1 343 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 ZNF347Q96SE7 839 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 PRSS27Q9BQR3 290 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 LRMDAQ9H2I8 198 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 ANKRD19PQ9H560 264 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 B3GAT2Q9NPZ5 323 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 SLC7A10Q9NS82 523 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 NDUFAF4Q9P032 175 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 ZNF229Q9UJW7 825 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 MAGED1Q9Y5V3 778 aaPredicted RBP14.44□□□□□ -0.1
SF3A1-209ENST00000496189 FBN2P35556 2912 aa14.44□□□□□ -0.1
SF3A1-209ENST00000496189 LOC102725191A0A1B0GVB3 256 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.43□□□□□ -0.1
SF3A1-209ENST00000496189 OR5H1A6NKK0 313 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 hCG_2039718K7EN88 272 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 WNT11O96014 354 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 IGF2P01344 180 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 MT-ND1P03886 318 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 H1F0P07305 194 aaKnown RBP14.43□□□□□ -0.1
SF3A1-209ENST00000496189 CD3EP07766 207 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 EDNRAP25101 427 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 POU3F1Q03052 451 aaPredicted RBP14.43□□□□□ -0.1
SF3A1-209ENST00000496189 CHRNB3Q05901 458 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 FOXD4Q12950 439 aaPredicted RBP14.43□□□□□ -0.1
SF3A1-209ENST00000496189 FLOT2Q14254 428 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 C9orf135Q5VTT2 229 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 PAMR1Q6UXH9 720 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 WDR88Q6ZMY6 472 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 NANOGNBQ7Z5D8 188 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 EPHX4Q8IUS5 362 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 NKAIN4Q8IVV8 208 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 RNF113BQ8IZP6 322 aaKnown RBP14.43□□□□□ -0.1
SF3A1-209ENST00000496189 ZIC4Q8N9L1 334 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 C7orf34Q96L11 122 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 MOGAT1Q96PD6 335 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 PIP5K1AQ99755 562 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 CADM1Q9BY67 442 aaKnown RBP14.43□□□□□ -0.1
SF3A1-209ENST00000496189 MAGIXQ9H6Y5 334 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 NMNAT1Q9HAN9 279 aaPredicted RBP14.43□□□□□ -0.1
SF3A1-209ENST00000496189 IL1RAPQ9NPH3 570 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 SEC14L4Q9UDX3 406 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 AMDHD2Q9Y303 409 aa14.43□□□□□ -0.1
SF3A1-209ENST00000496189 ANKRD17O75179 2603 aaKnown RBP14.42□□□□□ -0.1
SF3A1-209ENST00000496189 AQP12BA6NM10 295 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 ZNF726A6NNF4 738 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 J3KTA2 159 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 RNF13O43567 381 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 SERPINI2O75830 405 aa14.42□□□□□ -0.1
SF3A1-209ENST00000496189 CDH2P19022 906 aaPredicted RBP14.42□□□□□ -0.1
SF3A1-209ENST00000496189 NTF4P34130 210 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms