RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 CLEC2AQ6UVW9 174 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 LINGO2Q7L985 606 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 PTOV1Q86YD1 416 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 SLC30A8Q8IWU4 369 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 UEVLDQ8IX04 471 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 C10orf53Q8N6V4 93 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 FAM169BQ8N8A8 192 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 SMYD1Q8NB12 490 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 ADPRHL1Q8NDY3 354 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 PIK3C3Q8NEB9 887 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 OR10H5Q8NGA6 315 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 ALKBH3Q96Q83 286 aaPredicted RBP11.12□□□□□ -0.63
PTPRF-214ENST00000496043 SLC38A2Q96QD8 506 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 MCHR1Q99705 422 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 ASPNQ9BXN1 380 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 ZNF385DQ9H6B1 395 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 GPR35Q9HC97 309 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 KLHL14Q9P2G3 628 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 B3GAT1Q9P2W7 334 aa11.12□□□□□ -0.63
PTPRF-214ENST00000496043 HIVEP2P31629 2446 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 A0A0B4J2E0 115 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 IGHV1-18A0A0C4DH31 117 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 A0A0G2JND7 137 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 A0A1B0GX12 115 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 VSTM5A8MXK1 200 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 ATP6V1G2-DDX39BF2Z307 99 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 H7C417 338 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 FMO6PO60774 539 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 BGLAPP02818 100 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 H2AFXP16104 143 aaPredicted RBP11.11□□□□□ -0.63
PTPRF-214ENST00000496043 CBR1P16152 277 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 PCBP3P57721 371 aaKnown RBP11.11□□□□□ -0.63
PTPRF-214ENST00000496043 PMS2P3Q13401 168 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 CYLC2Q14093 348 aaPredicted RBP11.11□□□□□ -0.63
PTPRF-214ENST00000496043 DUSP7Q16829 419 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 SWT1Q5T5J6 900 aaKnown RBP11.11□□□□□ -0.63
PTPRF-214ENST00000496043 PATL1Q86TB9 770 aaKnown RBP11.11□□□□□ -0.63
PTPRF-214ENST00000496043 RETREG3Q86VR2 466 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 CCDC36Q8IYA8 594 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 SCAIQ8N9R8 606 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 SLC26A7Q8TE54 656 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 FBXO17Q96EF6 278 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 SLC41A3Q96GZ6 507 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 LRR1Q96L50 414 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 WFDC6Q9BQY6 131 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 TMEM43Q9BTV4 400 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 KATNB1Q9BVA0 655 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 KAT8Q9H7Z6 458 aaKnown RBP11.11□□□□□ -0.63
PTPRF-214ENST00000496043 CRNNQ9UBG3 495 aaPredicted RBP11.11□□□□□ -0.63
PTPRF-214ENST00000496043 ALPK2Q86TB3 2170 aa11.11□□□□□ -0.63
PTPRF-214ENST00000496043 HEATR1Q9H583 2144 aaKnown RBP11.11□□□□□ -0.63
PTPRF-214ENST00000496043 FN1P02751 2386 aaKnown RBP11.1□□□□□ -0.63
PTPRF-214ENST00000496043 ZNF726A6NNF4 738 aa11.1□□□□□ -0.63
PTPRF-214ENST00000496043 F12P00748 615 aaPredicted RBP11.1□□□□□ -0.63
PTPRF-214ENST00000496043 SERPINF1P36955 418 aa11.1□□□□□ -0.63
PTPRF-214ENST00000496043 EFNA4P52798 201 aa11.1□□□□□ -0.63
PTPRF-214ENST00000496043 MTPNP58546 118 aa11.1□□□□□ -0.63
PTPRF-214ENST00000496043 SELPLGQ14242 412 aa11.1□□□□□ -0.63
PTPRF-214ENST00000496043 SWI5Q1ZZU3 235 aa11.1□□□□□ -0.63
PTPRF-214ENST00000496043 MST1LQ2TV78 715 aa11.1□□□□□ -0.63
PTPRF-214ENST00000496043 CEACAM16Q2WEN9 425 aa11.1□□□□□ -0.63
PTPRF-214ENST00000496043 INTS11Q5TA45 600 aaKnown RBP11.1□□□□□ -0.63
PTPRF-214ENST00000496043 ZNF613Q6PF04 617 aa11.1□□□□□ -0.63
PTPRF-214ENST00000496043 LINC00114Q6XXX2 140 aa11.1□□□□□ -0.63
PTPRF-214ENST00000496043 OR4F15Q8NGB8 312 aa11.1□□□□□ -0.63
PTPRF-214ENST00000496043 OR10A6Q8NH74 314 aa11.1□□□□□ -0.63
PTPRF-214ENST00000496043 HTRA1Q92743 480 aa11.1□□□□□ -0.63
PTPRF-214ENST00000496043 OR2M2Q96R28 347 aa11.1□□□□□ -0.63
PTPRF-214ENST00000496043 ARHGDIGQ99819 225 aa11.1□□□□□ -0.63
PTPRF-214ENST00000496043 SH3GL1Q99961 368 aa11.1□□□□□ -0.63
PTPRF-214ENST00000496043 CRLF2Q9HC73 371 aa11.1□□□□□ -0.63
PTPRF-214ENST00000496043 B3GAT2Q9NPZ5 323 aa11.1□□□□□ -0.63
PTPRF-214ENST00000496043 MRPL39Q9NYK5 338 aaKnown RBP11.1□□□□□ -0.63
PTPRF-214ENST00000496043 NOX1Q9Y5S8 564 aa11.1□□□□□ -0.63
PTPRF-214ENST00000496043 IGHV4-30-2A0A087WSY4 118 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 SLC35F4A4IF30 521 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 M0R3G1 203 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 M0R3H8 397 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 PLPP3O14495 311 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 TRAF3IP2O43734 574 aaPredicted RBP11.09□□□□□ -0.63
PTPRF-214ENST00000496043 TLX2O43763 284 aaPredicted RBP11.09□□□□□ -0.63
PTPRF-214ENST00000496043 CD5LO43866 347 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 CRLF1O75462 422 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 HPRP00739 348 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 MT-ATP6P00846 226 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 IGLV1-44P01699 117 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 OPN1SWP03999 348 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 HLA-DOBP13765 273 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 AHCYP23526 432 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 ARR3P36575 388 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 TUBA1BP68363 451 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 TUBA4AP68366 448 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 NAAAQ02083 359 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 KRTAP1-1Q07627 177 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 PUDPQ08623 228 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 ENTPD8Q5MY95 495 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 CARD17Q5XLA6 110 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 NANOGP8Q6NSW7 305 aa11.09□□□□□ -0.63
PTPRF-214ENST00000496043 TTC33Q6PID6 262 aaPredicted RBP11.09□□□□□ -0.63
PTPRF-214ENST00000496043 TUBA1AQ71U36 451 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms