RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 HMGN4O00479 90 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 SLC43A1O75387 559 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 NCR1O76036 304 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 PRSS23O95084 383 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 CHRNGP07510 517 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 G6PDP11413 515 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 ZNF43P17038 809 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 ACAA2P42765 397 aaKnown RBP11.49□□□□□ -0.57
COL1A1-209ENST00000495677 ALDH3B1P43353 468 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 CLDN17P56750 224 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 RPS23P62266 143 aaKnown RBP11.49□□□□□ -0.57
COL1A1-209ENST00000495677 HPCAP84074 193 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 EMX2Q04743 252 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 CEACAM16Q2WEN9 425 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 PGS1Q32NB8 556 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 TRMT5Q32P41 509 aaKnown RBP11.49□□□□□ -0.57
COL1A1-209ENST00000495677 MRPL2Q5T653 305 aaKnown RBP11.49□□□□□ -0.57
COL1A1-209ENST00000495677 C1orf140Q5VVS0 124 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 DCAF12L2Q5VW00 463 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 WBP2NLQ6ICG8 309 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 DOK3Q7L591 496 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 OR4A15Q8NGL6 344 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 OXGR1Q96P68 337 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 UNKLQ9H9P5 680 aaKnown RBP11.49□□□□□ -0.57
COL1A1-209ENST00000495677 NKIRAS2Q9NYR9 191 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 PPIAL4AQ9Y536 164 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 NOX1Q9Y5S8 564 aa11.49□□□□□ -0.57
COL1A1-209ENST00000495677 PPIAL4EA0A075B759 164 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 PPIAL4CA0A0B4J2A2 164 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 FTCDNL1E5RQL4 147 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 PPIAL4DF5H284 164 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 IGHV2-5P01817 119 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 DBIP07108 87 aaKnown RBP11.48□□□□□ -0.57
COL1A1-209ENST00000495677 PPIAL4FP0DN26 164 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 CRYBB2P43320 205 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 TEKQ02763 1124 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 ZP4Q12836 540 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 BNIP2Q12982 314 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 GSG1Q2KHT4 349 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 ZCCHC23Q6ZST2 131 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 HMGN2P46Q86SG4 172 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 LRP11Q86VZ4 500 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 GPR137CQ8N3F9 429 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 PIK3C3Q8NEB9 887 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 VPS37AQ8NEZ2 397 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 LRR1Q96L50 414 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 GPA33Q99795 319 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 SYT3Q9BQG1 590 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 C7orf69Q9H7B7 122 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 MYEF2Q9P2K5 600 aaKnown RBP11.48□□□□□ -0.57
COL1A1-209ENST00000495677 B3GAT1Q9P2W7 334 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 OPN4Q9UHM6 478 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 CORINQ9Y5Q5 1042 aa11.48□□□□□ -0.57
COL1A1-209ENST00000495677 CDHR4A6H8M9 788 aa11.47□□□□□ -0.57
COL1A1-209ENST00000495677 C17orf100A8MU93 164 aa11.47□□□□□ -0.57
COL1A1-209ENST00000495677 COPEO14579 308 aa11.47□□□□□ -0.57
COL1A1-209ENST00000495677 PNMTP11086 282 aa11.47□□□□□ -0.57
COL1A1-209ENST00000495677 CASP8Q14790 479 aa11.47□□□□□ -0.57
COL1A1-209ENST00000495677 SYPL1Q16563 259 aa11.47□□□□□ -0.57
COL1A1-209ENST00000495677 ANXA8L1Q5VT79 327 aa11.47□□□□□ -0.57
COL1A1-209ENST00000495677 RBMS3Q6XE24 437 aaKnown RBP11.47□□□□□ -0.57
COL1A1-209ENST00000495677 TREML1Q86YW5 311 aa11.47□□□□□ -0.57
COL1A1-209ENST00000495677 KDM8Q8N371 416 aa11.47□□□□□ -0.57
COL1A1-209ENST00000495677 TESCQ96BS2 214 aa11.47□□□□□ -0.57
COL1A1-209ENST00000495677 MS4A3Q96HJ5 214 aa11.47□□□□□ -0.57
COL1A1-209ENST00000495677 ZIM3Q96PE6 472 aa11.47□□□□□ -0.57
COL1A1-209ENST00000495677 TXLNGYQ9BZA5 131 aa11.47□□□□□ -0.57
COL1A1-209ENST00000495677 DPY30Q9C005 99 aa11.47□□□□□ -0.57
COL1A1-209ENST00000495677 NOP53Q9NZM5 478 aaKnown RBP11.47□□□□□ -0.57
COL1A1-209ENST00000495677 MARCOQ9UEW3 520 aaPredicted RBP11.47□□□□□ -0.57
COL1A1-209ENST00000495677 GPR160Q9UJ42 338 aa11.47□□□□□ -0.57
COL1A1-209ENST00000495677 FBXL3Q9UKT7 428 aa11.47□□□□□ -0.57
COL1A1-209ENST00000495677 NOTCH1P46531 2555 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 IGLV3-9A0A075B6K5 115 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 CLDN34H7C241 214 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 NAT2P11245 290 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 GCH1P30793 250 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 SERPINB5P36952 375 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 CAPZA2P47755 286 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 COPZ1P61923 177 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 MAD2L1BPQ15013 274 aaPredicted RBP11.46□□□□□ -0.57
COL1A1-209ENST00000495677 WHAMMP3Q1A5X7 153 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 PCGF3Q3KNV8 242 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 LSRQ86X29 649 aaPredicted RBP11.46□□□□□ -0.57
COL1A1-209ENST00000495677 PEX5LQ8IYB4 626 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 TMEM123Q8N131 208 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 ANKFN1Q8N957 763 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 NOA1Q8NC60 698 aaKnown RBP11.46□□□□□ -0.57
COL1A1-209ENST00000495677 POP5Q969H6 163 aaKnown RBP11.46□□□□□ -0.57
COL1A1-209ENST00000495677 TUBGCP3Q96CW5 907 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 OR2M2Q96R28 347 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 PTDSS2Q9BVG9 487 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 PPCSQ9HAB8 311 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 RLIMQ9NVW2 624 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 ZNF224Q9NZL3 707 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 SLC7A8Q9UHI5 535 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 DUSP13Q9UII6 198 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 ZDHHC2Q9UIJ5 367 aa11.46□□□□□ -0.57
COL1A1-209ENST00000495677 SLC22A23A1A5C7 686 aa11.45□□□□□ -0.58
COL1A1-209ENST00000495677 TRAF3IP2O43734 574 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms