RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 CDKN1AP38936 164 aa29.07■■■□□ 2.24
CBX4-203ENST00000494546 CRYBA2P53672 197 aa29.07■■■□□ 2.24
CBX4-203ENST00000494546 ROR2Q01974 943 aaKnown RBP29.07■■■□□ 2.24
CBX4-203ENST00000494546 PMS2P3Q13401 168 aa29.07■■■□□ 2.24
CBX4-203ENST00000494546 MS4A18Q3C1V0 323 aa29.07■■■□□ 2.24
CBX4-203ENST00000494546 TBRG1Q3YBR2 411 aa29.07■■■□□ 2.24
CBX4-203ENST00000494546 USF3Q68DE3 2245 aa29.07■■■□□ 2.24
CBX4-203ENST00000494546 BIVMQ86UB2 503 aa29.07■■■□□ 2.24
CBX4-203ENST00000494546 UEVLDQ8IX04 471 aa29.07■■■□□ 2.24
CBX4-203ENST00000494546 DEPDC4Q8N2C3 294 aa29.07■■■□□ 2.24
CBX4-203ENST00000494546 ADAMTS16Q8TE57 1224 aa29.07■■■□□ 2.24
CBX4-203ENST00000494546 SLC41A3Q96GZ6 507 aa29.07■■■□□ 2.24
CBX4-203ENST00000494546 ZNF317Q96PQ6 595 aaPredicted RBP29.07■■■□□ 2.24
CBX4-203ENST00000494546 BDH2Q9BUT1 245 aa29.07■■■□□ 2.24
CBX4-203ENST00000494546 HPRP00739 348 aa29.06■■■□□ 2.24
CBX4-203ENST00000494546 ERICH5Q6P6B1 374 aa29.06■■■□□ 2.24
CBX4-203ENST00000494546 CIARTQ8N365 385 aaPredicted RBP29.06■■■□□ 2.24
CBX4-203ENST00000494546 GPR137CQ8N3F9 429 aa29.06■■■□□ 2.24
CBX4-203ENST00000494546 POU5F2Q8N7G0 328 aa29.06■■■□□ 2.24
CBX4-203ENST00000494546 SCAIQ8N9R8 606 aa29.06■■■□□ 2.24
CBX4-203ENST00000494546 PROX1Q92786 737 aa29.06■■■□□ 2.24
CBX4-203ENST00000494546 TRMT61AQ96FX7 289 aaKnown RBP29.06■■■□□ 2.24
CBX4-203ENST00000494546 ZNF583Q96ND8 569 aa29.06■■■□□ 2.24
CBX4-203ENST00000494546 LOC102725191A0A1B0GVB3 256 aa29.05■■■□□ 2.24
CBX4-203ENST00000494546 TRAPPC13A5PLN9 417 aa29.05■■■□□ 2.24
CBX4-203ENST00000494546 E7EQL1 145 aa29.05■■■□□ 2.24
CBX4-203ENST00000494546 SLC22A2O15244 555 aa29.05■■■□□ 2.24
CBX4-203ENST00000494546 TRAF3IP2O43734 574 aaPredicted RBP29.05■■■□□ 2.24
CBX4-203ENST00000494546 AKAP8O43823 692 aaKnown RBP29.05■■■□□ 2.24
CBX4-203ENST00000494546 THY1P04216 161 aa29.05■■■□□ 2.24
CBX4-203ENST00000494546 C1QTNF12Q5T7M4 302 aa29.05■■■□□ 2.24
CBX4-203ENST00000494546 LINC00114Q6XXX2 140 aa29.05■■■□□ 2.24
CBX4-203ENST00000494546 WDR88Q6ZMY6 472 aa29.05■■■□□ 2.24
CBX4-203ENST00000494546 RCN3Q96D15 328 aa29.05■■■□□ 2.24
CBX4-203ENST00000494546 TRAF4Q9BUZ4 470 aaPredicted RBP29.05■■■□□ 2.24
CBX4-203ENST00000494546 MRPL39Q9NYK5 338 aaKnown RBP29.05■■■□□ 2.24
CBX4-203ENST00000494546 SLC7A7Q9UM01 511 aa29.05■■■□□ 2.24
CBX4-203ENST00000494546 A0A096LPE4 126 aa29.04■■■□□ 2.24
CBX4-203ENST00000494546 A0A1W2PPZ6 126 aa29.04■■■□□ 2.24
CBX4-203ENST00000494546 HLA-DOBP13765 273 aa29.04■■■□□ 2.24
CBX4-203ENST00000494546 UBE2NP61088 152 aaKnown RBP29.04■■■□□ 2.24
CBX4-203ENST00000494546 POU3F1Q03052 451 aaPredicted RBP29.04■■■□□ 2.24
CBX4-203ENST00000494546 VEZF1Q14119 521 aa29.04■■■□□ 2.24
CBX4-203ENST00000494546 TTC33Q6PID6 262 aaPredicted RBP29.04■■■□□ 2.24
CBX4-203ENST00000494546 TSPYL5Q86VY4 417 aaPredicted RBP29.04■■■□□ 2.24
CBX4-203ENST00000494546 BCL2L2Q92843 193 aaPredicted RBP29.04■■■□□ 2.24
CBX4-203ENST00000494546 BOD1Q96IK1 185 aa29.04■■■□□ 2.24
CBX4-203ENST00000494546 OR2M2Q96R28 347 aa29.04■■■□□ 2.24
CBX4-203ENST00000494546 OBP2BQ9NPH6 170 aa29.04■■■□□ 2.24
CBX4-203ENST00000494546 SH3GLB1Q9Y371 365 aa29.04■■■□□ 2.24
CBX4-203ENST00000494546 SMAD7O15105 426 aaKnown RBP29.03■■■□□ 2.24
CBX4-203ENST00000494546 LYPD3O95274 346 aa29.03■■■□□ 2.24
CBX4-203ENST00000494546 CD8AP01732 235 aa29.03■■■□□ 2.24
CBX4-203ENST00000494546 PUDPQ08623 228 aa29.03■■■□□ 2.24
CBX4-203ENST00000494546 AGAP6Q5VW22 663 aa29.03■■■□□ 2.24
CBX4-203ENST00000494546 CARD17Q5XLA6 110 aa29.03■■■□□ 2.24
CBX4-203ENST00000494546 B3GLCTQ6Y288 498 aa29.03■■■□□ 2.24
CBX4-203ENST00000494546 CARM1Q86X55 608 aa29.03■■■□□ 2.24
CBX4-203ENST00000494546 PIK3C3Q8NEB9 887 aa29.03■■■□□ 2.24
CBX4-203ENST00000494546 COX4I2Q96KJ9 171 aa29.03■■■□□ 2.24
CBX4-203ENST00000494546 DHRS9Q9BPW9 319 aa29.03■■■□□ 2.24
CBX4-203ENST00000494546 PCDHAC1Q9H158 963 aa29.03■■■□□ 2.24
CBX4-203ENST00000494546 BAG5Q9UL15 447 aa29.03■■■□□ 2.24
CBX4-203ENST00000494546 C2CD3Q4AC94 2353 aa29.03■■■□□ 2.24
CBX4-203ENST00000494546 SERPINI2O75830 405 aa29.02■■■□□ 2.24
CBX4-203ENST00000494546 MT-ATP6P00846 226 aa29.02■■■□□ 2.24
CBX4-203ENST00000494546 TNFRSF1BP20333 461 aa29.02■■■□□ 2.24
CBX4-203ENST00000494546 AHCYP23526 432 aa29.02■■■□□ 2.24
CBX4-203ENST00000494546 SH3BGRP55822 239 aaPredicted RBP29.02■■■□□ 2.24
CBX4-203ENST00000494546 ANKRD16Q6P6B7 361 aa29.02■■■□□ 2.24
CBX4-203ENST00000494546 DTX2Q86UW9 622 aa29.02■■■□□ 2.24
CBX4-203ENST00000494546 EMC6Q9BV81 110 aa29.02■■■□□ 2.24
CBX4-203ENST00000494546 FKRPQ9H9S5 495 aa29.02■■■□□ 2.24
CBX4-203ENST00000494546 GPR35Q9HC97 309 aa29.02■■■□□ 2.24
CBX4-203ENST00000494546 ATP23Q9Y6H3 246 aa29.02■■■□□ 2.24
CBX4-203ENST00000494546 FAM220BPB1ANY3 271 aa29.01■■■□□ 2.23
CBX4-203ENST00000494546 KPNA4O00629 521 aaPredicted RBP29.01■■■□□ 2.23
CBX4-203ENST00000494546 PLPP3O14495 311 aa29.01■■■□□ 2.23
CBX4-203ENST00000494546 ATP8B1O43520 1251 aa29.01■■■□□ 2.23
CBX4-203ENST00000494546 TUBA1BP68363 451 aa29.01■■■□□ 2.23
CBX4-203ENST00000494546 TUBA4AP68366 448 aa29.01■■■□□ 2.23
CBX4-203ENST00000494546 ARF1P84077 181 aaKnown RBP29.01■■■□□ 2.23
CBX4-203ENST00000494546 Q71RC1 249 aaPredicted RBP29.01■■■□□ 2.23
CBX4-203ENST00000494546 TUBA1AQ71U36 451 aa29.01■■■□□ 2.23
CBX4-203ENST00000494546 TMEM123Q8N131 208 aa29.01■■■□□ 2.23
CBX4-203ENST00000494546 RP9Q8TA86 221 aaKnown RBP29.01■■■□□ 2.23
CBX4-203ENST00000494546 MED29Q9NX70 200 aa29.01■■■□□ 2.23
CBX4-203ENST00000494546 NOX1Q9Y5S8 564 aa29.01■■■□□ 2.23
CBX4-203ENST00000494546 RPL36A-HNRNPH2H7BZ11 118 aa29■■■□□ 2.23
CBX4-203ENST00000494546 M0R3G1 203 aa29■■■□□ 2.23
CBX4-203ENST00000494546 CH25HO95992 272 aa29■■■□□ 2.23
CBX4-203ENST00000494546 IFNA14P01570 189 aa29■■■□□ 2.23
CBX4-203ENST00000494546 TTKP33981 857 aa29■■■□□ 2.23
CBX4-203ENST00000494546 FABP6P51161 128 aa29■■■□□ 2.23
CBX4-203ENST00000494546 CEACAM16Q2WEN9 425 aa29■■■□□ 2.23
CBX4-203ENST00000494546 LRRC23Q53EV4 343 aaPredicted RBP29■■■□□ 2.23
CBX4-203ENST00000494546 CLEC9AQ6UXN8 241 aa29■■■□□ 2.23
CBX4-203ENST00000494546 FBXL14Q8N1E6 418 aa29■■■□□ 2.23
CBX4-203ENST00000494546 ANKK1Q8NFD2 765 aa29■■■□□ 2.23
CBX4-203ENST00000494546 OR2T12Q8NG77 320 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms