RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 NKAIN4Q8IVV8 208 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 GTPBP8Q8N3Z3 284 aaPredicted RBP10.87□□□□□ -0.67
UPF3A-210ENST00000493727 SVOPLQ8N434 492 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 OR5K1Q8NHB7 308 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 PIGXQ8TBF5 258 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 SLC7A13Q8TCU3 470 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 GIPC3Q8TF64 312 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 TMEM255BQ8WV15 326 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 TMEM239Q8WW34 195 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 ACOT11Q8WXI4 607 aaPredicted RBP10.87□□□□□ -0.67
UPF3A-210ENST00000493727 SMPDL3BQ92485 455 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 NINJ1Q92982 152 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 EME1Q96AY2 570 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 DHRS1Q96LJ7 313 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 Q96M66 194 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 HS6ST2Q96MM7 605 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 SLC6A15Q9H2J7 730 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 UBQLN3Q9H347 655 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 PDP1Q9P0J1 537 aaPredicted RBP10.87□□□□□ -0.67
UPF3A-210ENST00000493727 CHRNA9Q9UGM1 479 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 OSGIN1Q9UJX0 560 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 TMED7Q9Y3B3 224 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 MED31Q9Y3C7 131 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 MRPS18CQ9Y3D5 142 aaKnown RBP10.87□□□□□ -0.67
UPF3A-210ENST00000493727 A0A087WUJ7 227 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 TMEM72A0PK05 275 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 OR2M5A3KFT3 312 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 C7orf72A4D263 438 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 G3V2T6 193 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 H3BML4 177 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 LYPD3O95274 346 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 HPNP05981 417 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 TFPIP10646 304 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 PEPDP12955 493 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 KLK2P20151 261 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 ELK4P28324 431 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 TIMP3P35625 211 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 RBM34P42696 430 aaKnown RBP10.86□□□□□ -0.67
UPF3A-210ENST00000493727 ASCL1P50553 236 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 UGT2B15P54855 530 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 GP2P55259 537 aaKnown RBP10.86□□□□□ -0.67
UPF3A-210ENST00000493727 SELENBP1Q13228 472 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 SLC25A53Q5H9E4 307 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 C3orf33Q6P1S2 294 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 MBOAT2Q6ZWT7 520 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 STK32CQ86UX6 486 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 C10orf53Q8N6V4 93 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 OR10G2Q8NGC3 310 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 OR4C15Q8NGM1 316 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 POC1BQ8TC44 478 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 ZNF524Q96C55 264 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 DDIT4LQ96D03 193 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 HRASLS5Q96KN8 279 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 PRSS27Q9BQR3 290 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 C9orf16Q9BUW7 83 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 TMEM185BQ9H7F4 350 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 NTN4Q9HB63 628 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 MAN2C1Q9NTJ4 1040 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 OAZ3Q9UMX2 235 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 CSPG4Q6UVK1 2322 aa10.86□□□□□ -0.67
UPF3A-210ENST00000493727 TLN2Q9Y4G6 2542 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 MED12Q93074 2177 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 A0A087WUU8 490 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 SH3PXD2BA1X283 911 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 GJE1A6NN92 205 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 A8MVM7 634 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 ETV2O00321 342 aaPredicted RBP10.85□□□□□ -0.67
UPF3A-210ENST00000493727 PIP5K1CO60331 668 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 ZIC3O60481 467 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 AHSA1O95433 338 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 NTN1O95631 604 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 FUT4P22083 530 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 FKBP2P26885 142 aaKnown RBP10.85□□□□□ -0.67
UPF3A-210ENST00000493727 CEACAM8P31997 349 aaPredicted RBP10.85□□□□□ -0.67
UPF3A-210ENST00000493727 SFTPDP35247 375 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 KIR2DL3P43628 341 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 MAP2K6P52564 334 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 DLX5P56178 289 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 CRYZQ08257 329 aaKnown RBP10.85□□□□□ -0.67
UPF3A-210ENST00000493727 SNCBQ16143 134 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 MICAQ29983 383 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 FBXL19-AS1Q494R0 122 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 ACSF3Q4G176 576 aaPredicted RBP10.85□□□□□ -0.67
UPF3A-210ENST00000493727 OTUD3Q5T2D3 398 aaPredicted RBP10.85□□□□□ -0.67
UPF3A-210ENST00000493727 WDR88Q6ZMY6 472 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 NLRC3Q7RTR2 1065 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 TMEM179BQ7Z7N9 219 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 ADGRG3Q86Y34 549 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 LIX1LQ8IVB5 337 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 P3H2Q8IVL5 708 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 NRMQ8IXM6 262 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 CDK20Q8IZL9 346 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 LINC00471Q8N535 108 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 ATG16L2Q8NAA4 619 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 AQP11Q8NBQ7 271 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 OR4K5Q8NGD3 323 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 OR9Q2Q8NGE9 314 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 PFN4Q8NHR9 129 aa10.85□□□□□ -0.67
UPF3A-210ENST00000493727 SLC25A43Q8WUT9 341 aaPredicted RBP10.85□□□□□ -0.67
UPF3A-210ENST00000493727 NRBF2Q96F24 287 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms