RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 E9PBE3 544 aa15.17■□□□□ 0.02
NUP50-218ENST00000493456 PPIHO43447 177 aaKnown RBP15.17■□□□□ 0.02
NUP50-218ENST00000493456 FZD7O75084 574 aa15.17■□□□□ 0.02
NUP50-218ENST00000493456 NCF2P19878 526 aaPredicted RBP15.17■□□□□ 0.02
NUP50-218ENST00000493456 S100A3P33764 101 aa15.17■□□□□ 0.02
NUP50-218ENST00000493456 ALDH3B1P43353 468 aa15.17■□□□□ 0.02
NUP50-218ENST00000493456 LMO4P61968 165 aa15.17■□□□□ 0.02
NUP50-218ENST00000493456 PDCD2Q16342 344 aaPredicted RBP15.17■□□□□ 0.02
NUP50-218ENST00000493456 MSMPQ1L6U9 139 aa15.17■□□□□ 0.02
NUP50-218ENST00000493456 TRMT5Q32P41 509 aaKnown RBP15.17■□□□□ 0.02
NUP50-218ENST00000493456 ZNF311Q5JNZ3 666 aa15.17■□□□□ 0.02
NUP50-218ENST00000493456 ZNF836Q6ZNA1 936 aa15.17■□□□□ 0.02
NUP50-218ENST00000493456 C1QL2Q7Z5L3 287 aa15.17■□□□□ 0.02
NUP50-218ENST00000493456 KDM8Q8N371 416 aa15.17■□□□□ 0.02
NUP50-218ENST00000493456 RIBC1Q8N443 379 aaPredicted RBP15.17■□□□□ 0.02
NUP50-218ENST00000493456 OR52P1PQ8NH57 321 aa15.17■□□□□ 0.02
NUP50-218ENST00000493456 TCP10LQ8TDR4 215 aa15.17■□□□□ 0.02
NUP50-218ENST00000493456 OXGR1Q96P68 337 aa15.17■□□□□ 0.02
NUP50-218ENST00000493456 RHOXF2Q9BQY4 288 aa15.17■□□□□ 0.02
NUP50-218ENST00000493456 ZNF385DQ9H6B1 395 aa15.17■□□□□ 0.02
NUP50-218ENST00000493456 G6PC2Q9NQR9 355 aa15.17■□□□□ 0.02
NUP50-218ENST00000493456 B3GNT2Q9NY97 397 aa15.17■□□□□ 0.02
NUP50-218ENST00000493456 B3GAT1Q9P2W7 334 aa15.17■□□□□ 0.02
NUP50-218ENST00000493456 DSPPQ9NZW4 1301 aa15.17■□□□□ 0.02
NUP50-218ENST00000493456 LOC105371242A0A075B767 164 aa15.16■□□□□ 0.02
NUP50-218ENST00000493456 CCDC154A6NI56 674 aa15.16■□□□□ 0.02
NUP50-218ENST00000493456 WNT9BO14905 357 aa15.16■□□□□ 0.02
NUP50-218ENST00000493456 C1QCP02747 245 aa15.16■□□□□ 0.02
NUP50-218ENST00000493456 ZNF35P13682 527 aa15.16■□□□□ 0.02
NUP50-218ENST00000493456 TCN1P20061 433 aaPredicted RBP15.16■□□□□ 0.02
NUP50-218ENST00000493456 LRRC74AQ0VAA2 488 aa15.16■□□□□ 0.02
NUP50-218ENST00000493456 C1DQ13901 141 aaKnown RBP15.16■□□□□ 0.02
NUP50-218ENST00000493456 GSG1Q2KHT4 349 aa15.16■□□□□ 0.02
NUP50-218ENST00000493456 GKAP1Q5VSY0 366 aaPredicted RBP15.16■□□□□ 0.02
NUP50-218ENST00000493456 RNF220Q5VTB9 566 aa15.16■□□□□ 0.02
NUP50-218ENST00000493456 C1orf229Q6ZS94 237 aaPredicted RBP15.16■□□□□ 0.02
NUP50-218ENST00000493456 EIF1ADQ8N9N8 165 aaKnown RBP15.16■□□□□ 0.02
NUP50-218ENST00000493456 YIPF5Q969M3 257 aa15.16■□□□□ 0.02
NUP50-218ENST00000493456 SLC25A36Q96CQ1 311 aa15.16■□□□□ 0.02
NUP50-218ENST00000493456 ZNF837Q96EG3 531 aaPredicted RBP15.16■□□□□ 0.02
NUP50-218ENST00000493456 OR2M2Q96R28 347 aa15.16■□□□□ 0.02
NUP50-218ENST00000493456 PANX1Q96RD7 426 aa15.16■□□□□ 0.02
NUP50-218ENST00000493456 SYT3Q9BQG1 590 aa15.16■□□□□ 0.02
NUP50-218ENST00000493456 PTDSS2Q9BVG9 487 aa15.16■□□□□ 0.02
NUP50-218ENST00000493456 CALML5Q9NZT1 146 aa15.16■□□□□ 0.02
NUP50-218ENST00000493456 P2RX2Q9UBL9 471 aa15.16■□□□□ 0.02
NUP50-218ENST00000493456 ZNF346Q9UL40 294 aaKnown RBP15.16■□□□□ 0.02
NUP50-218ENST00000493456 A0A0G2JMP0 313 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 A0A0X1KG70 313 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 J3QLI3 93 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 AIM2O14862 343 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 TMPRSS2O15393 492 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 RP2O75695 350 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 HLA-HP01893 362 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 BPGMP07738 259 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 CD79AP11912 226 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 ZNF14P17017 642 aaPredicted RBP15.15■□□□□ 0.02
NUP50-218ENST00000493456 RPS5P46782 204 aaKnown RBP15.15■□□□□ 0.02
NUP50-218ENST00000493456 GALK2Q01415 458 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 LARS2Q15031 903 aaKnown RBP15.15■□□□□ 0.02
NUP50-218ENST00000493456 FXNQ16595 210 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 MMEL1Q495T6 779 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 PDLIM3Q53GG5 364 aaPredicted RBP15.15■□□□□ 0.02
NUP50-218ENST00000493456 ACSM5Q6NUN0 579 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 SHISA2Q6UWI4 295 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 VRK2Q86Y07 508 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 LRRC34Q8IZ02 419 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 OR4M2Q8NGB6 313 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 MS4A3Q96HJ5 214 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 PPP1R36Q96LQ0 422 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 ZNF747Q9BV97 191 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 DENND2DQ9H6A0 471 aaPredicted RBP15.15■□□□□ 0.02
NUP50-218ENST00000493456 ARMC7Q9H6L4 198 aa15.15■□□□□ 0.02
NUP50-218ENST00000493456 ZNF443Q9Y2A4 671 aaPredicted RBP15.15■□□□□ 0.02
NUP50-218ENST00000493456 CMYA5Q8N3K9 4069 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 SPAG7O75391 227 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 NCR1O76036 304 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 SEC14L2O76054 403 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 BCL10O95999 233 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 AVPP01185 164 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 SEC24CP53992 1094 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 CRISP3P54108 245 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 EGR4Q05215 589 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 MAPK11Q15759 364 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 COX20Q5RI15 118 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 ATG16L1Q676U5 607 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 C5orf46Q6UWT4 87 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 ZNF627Q7L945 461 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 TMEM123Q8N131 208 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 BPIFB2Q8N4F0 458 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 MGARPQ8TDB4 240 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 RAB39BQ96DA2 213 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 ZNF75AQ96N20 296 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 SLC6A7Q99884 636 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 ZNF665Q9H7R5 613 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 CACYBPQ9HB71 228 aaKnown RBP15.14■□□□□ 0.01
NUP50-218ENST00000493456 FBXL3Q9UKT7 428 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 PCDHGB1Q9Y5G3 927 aa15.14■□□□□ 0.01
NUP50-218ENST00000493456 LOC102725191A0A1B0GVB3 256 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 A0A1W2PPW3 197 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms