RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 INTS12Q96CB8 462 aaKnown RBP15.32■□□□□ 0.04
LIME1-208ENST00000493265 TTYH2Q9BSA4 534 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 C9orf16Q9BUW7 83 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 DGCR6LQ9BY27 220 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 EGLN3Q9H6Z9 239 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 MCCC2Q9HCC0 563 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 TAS2R5Q9NYW4 299 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 RASD1Q9Y272 281 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 ZGRF1Q86YA3 2104 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 SOCS2O14508 198 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 EI24O14681 340 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 MITFO75030 526 aaPredicted RBP15.31■□□□□ 0.04
LIME1-208ENST00000493265 HLA-DOBP13765 273 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 GSTM3P21266 225 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 POU1F1P28069 291 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 PEX2P28328 305 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 RPL4P36578 427 aaKnown RBP15.31■□□□□ 0.04
LIME1-208ENST00000493265 SIRPAP78324 504 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 POU3F1Q03052 451 aaPredicted RBP15.31■□□□□ 0.04
LIME1-208ENST00000493265 ALG10Q5BKT4 473 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 EEF1A1P5Q5VTE0 462 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 GTF2IRD2BQ6EKJ0 949 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 ABLIM2Q6H8Q1 611 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 FAHD1Q6P587 224 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 KLHL17Q6TDP4 642 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 ZBTB49Q6ZSB9 765 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 SEM1Q6ZVN7 128 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 GTF2IRD2Q86UP8 949 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 KIF18BQ86Y91 864 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 UEVLDQ8IX04 471 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 SLC43A2Q8N370 569 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 MARVELD2Q8N4S9 558 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 OR9K2Q8NGE7 335 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 MAGEE2Q8TD90 523 aaPredicted RBP15.31■□□□□ 0.04
LIME1-208ENST00000493265 SAMD8Q96LT4 415 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 OXGR1Q96P68 337 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 TM9SF2Q99805 663 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 PSD2Q9BQI7 771 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 GABARAPL1Q9H0R8 117 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 KRT84Q9NSB2 600 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 KLHL9Q9P2J3 617 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 SIGLEC7Q9Y286 467 aa15.31■□□□□ 0.04
LIME1-208ENST00000493265 LRBAP50851 2863 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 WIPF3A6NGB9 483 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 H3BN98 237 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 LRRTM2O43300 516 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 IL2RAP01589 272 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 STSP08842 583 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 ZNF26P17031 533 aaPredicted RBP15.3■□□□□ 0.04
LIME1-208ENST00000493265 ZNF43P17038 809 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 IGFBP5P24593 272 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 UQCRC1P31930 480 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 TOP3AQ13472 1001 aaPredicted RBP15.3■□□□□ 0.04
LIME1-208ENST00000493265 FHL1Q13642 323 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 DAG1Q14118 895 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 RNPS1Q15287 305 aaKnown RBP15.3■□□□□ 0.04
LIME1-208ENST00000493265 TAF11Q15544 211 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 CLEC12AQ5QGZ9 265 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 SMARCD3Q6STE5 483 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 THSD4Q6ZMP0 1018 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 TUSC5Q8IXB3 177 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 GALNT4Q8N4A0 578 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 CNEP1R1Q8N9A8 125 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 ADPRHL1Q8NDY3 354 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 SLC29A1Q99808 456 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 ENKD1Q9H0I2 346 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 OR52D1Q9H346 318 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 RNF122Q9H9V4 155 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 PAPOLBQ9NRJ5 636 aaKnown RBP15.3■□□□□ 0.04
LIME1-208ENST00000493265 INIPQ9NRY2 104 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 TBC1D23Q9NUY8 699 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 SLC5A6Q9Y289 635 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 HIF3AQ9Y2N7 669 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 MEMO1Q9Y316 297 aa15.3■□□□□ 0.04
LIME1-208ENST00000493265 MBD3L4A6NDZ8 208 aaPredicted RBP15.29■□□□□ 0.04
LIME1-208ENST00000493265 MBD3L3A6NE82 208 aaPredicted RBP15.29■□□□□ 0.04
LIME1-208ENST00000493265 MBD3L5A6NJ08 208 aaPredicted RBP15.29■□□□□ 0.04
LIME1-208ENST00000493265 ZNF716A6NP11 495 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 MCIDASD6RGH6 385 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 E9PLN8 166 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 FZD7O75084 574 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 PTP4A3O75365 173 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 TOXO94900 526 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 NDUFB2O95178 105 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 VAMP5O95183 116 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 RCBTB2O95199 551 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 TMIGD3P0DMS9 266 aaPredicted RBP15.29■□□□□ 0.04
LIME1-208ENST00000493265 FXYD6P3P58550 94 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 CTXN1P60606 82 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 RPS4XP62701 263 aaKnown RBP15.29■□□□□ 0.04
LIME1-208ENST00000493265 FOXF2Q12947 444 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 RIPK1Q13546 671 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 SLC17A1Q14916 467 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 FBXW10Q5XX13 1052 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 OR2A2Q6IF42 318 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 ZNF620Q6ZNG0 422 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 RASSF6Q6ZTQ3 369 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.29■□□□□ 0.04
LIME1-208ENST00000493265 MBD3L2Q8NHZ7 208 aaPredicted RBP15.29■□□□□ 0.04
LIME1-208ENST00000493265 RBM4BQ9BQ04 359 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms