RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 TBPL2Q6SJ96 375 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 CCDC121Q6ZUS5 278 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 MBOAT2Q6ZWT7 520 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 SLC46A3Q7Z3Q1 461 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 NANOGNBQ7Z5D8 188 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 PXKQ7Z7A4 578 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 ZDHHC21Q8IVQ6 265 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 ZNF295-AS1Q8N0V1 137 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 STEAP2Q8NFT2 490 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 KISS1RQ969F8 398 aaPredicted RBP12.35□□□□□ -0.43
CCM2-217ENST00000492883 BPIFA2Q96DR5 249 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 ZC3HAV1LQ96H79 300 aaKnown RBP12.35□□□□□ -0.43
CCM2-217ENST00000492883 CADM1Q9BY67 442 aaKnown RBP12.35□□□□□ -0.43
CCM2-217ENST00000492883 ACTR6Q9GZN1 396 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 SLC7A10Q9NS82 523 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 TAS2R5Q9NYW4 299 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 BAHCC1Q9P281 2608 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 CIB4A0PJX0 185 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 EBAG9O00559 213 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 LYZL6O75951 148 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 GADD45GO95257 159 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 PPP3CBP16298 524 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 IGHV1-2P23083 117 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 SSTR2P30874 369 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 DNAJA1P31689 397 aaKnown RBP12.34□□□□□ -0.43
CCM2-217ENST00000492883 CCKARP32238 428 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 TLE4Q04727 773 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 PRKCDQ05655 676 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 ZP4Q12836 540 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 FLOT2Q14254 428 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 IQCCQ4KMZ1 466 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 BHLHA15Q7RTS1 189 aaPredicted RBP12.34□□□□□ -0.43
CCM2-217ENST00000492883 MEX3DQ86XN8 651 aaKnown RBP12.34□□□□□ -0.43
CCM2-217ENST00000492883 POMGNT2Q8NAT1 580 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 ANKK1Q8NFD2 765 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 SLC7A13Q8TCU3 470 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 LIPHQ8WWY8 451 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 C14orf79Q96F83 325 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 SLCO5A1Q9H2Y9 848 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 MAGIXQ9H6Y5 334 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 MCCC2Q9HCC0 563 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 ZNF226Q9NYT6 803 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 RCE1Q9Y256 329 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 ARHGAP21Q5T5U3 1957 aa12.34□□□□□ -0.43
CCM2-217ENST00000492883 USP9XQ93008 2570 aaPredicted RBP12.33□□□□□ -0.43
CCM2-217ENST00000492883 DOPEY1Q5JWR5 2465 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 TRBV4-1A0A0J9YWV2 114 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 OR6C65A6NJZ3 312 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 AQP12BA6NM10 295 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 EFCAB9A8MZ26 197 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 TRAF3IP2O43734 574 aaPredicted RBP12.33□□□□□ -0.44
CCM2-217ENST00000492883 SLC43A1O75387 559 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 IFNGR1P15260 489 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 RRM2P31350 389 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 AQP2P41181 271 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 LAPTM4AQ15012 233 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 CARD17Q5XLA6 110 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 FBXW10Q5XX13 1052 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 ALKBH2Q6NS38 261 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 PIWIL3Q7Z3Z3 882 aaKnown RBP12.33□□□□□ -0.44
CCM2-217ENST00000492883 ABHD12BQ7Z5M8 362 aaPredicted RBP12.33□□□□□ -0.44
CCM2-217ENST00000492883 SPATA24Q86W54 205 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 AQP12AQ8IXF9 295 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 S100PBPQ96BU1 408 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 TXNDC15Q96J42 360 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 USB1Q9BQ65 265 aaKnown RBP12.33□□□□□ -0.44
CCM2-217ENST00000492883 EMC6Q9BV81 110 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 OR10A4Q9H209 315 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 MMADHCQ9H3L0 296 aaPredicted RBP12.33□□□□□ -0.44
CCM2-217ENST00000492883 KRCC1Q9NPI7 259 aaPredicted RBP12.33□□□□□ -0.44
CCM2-217ENST00000492883 MED29Q9NX70 200 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 TAS2R16Q9NYV7 291 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 MALT1Q9UDY8 824 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 TMCC3Q9ULS5 477 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 AURKCQ9UQB9 309 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 POMPQ9Y244 141 aa12.33□□□□□ -0.44
CCM2-217ENST00000492883 SLC35F4A4IF30 521 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 UPK3AO75631 287 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 KRT36O76013 467 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 ZNF432O94892 652 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 F13BP05160 661 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 PRF1P14222 555 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 CDH2P19022 906 aaPredicted RBP12.32□□□□□ -0.44
CCM2-217ENST00000492883 COX5AP20674 150 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 MAKP20794 623 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 GPR4P46093 362 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 RPL18Q07020 188 aaKnown RBP12.32□□□□□ -0.44
CCM2-217ENST00000492883 DAZAP2Q15038 168 aaPredicted RBP12.32□□□□□ -0.44
CCM2-217ENST00000492883 STK11Q15831 433 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 C9orf135Q5VTT2 229 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 SLC35D2Q76EJ3 337 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 OAFQ86UD1 273 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 GPR137CQ8N3F9 429 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 ZNF433Q8N7K0 673 aaPredicted RBP12.32□□□□□ -0.44
CCM2-217ENST00000492883 OR4K5Q8NGD3 323 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 OR51A7Q8NH64 312 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 DHRS1Q96LJ7 313 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 ALPK1Q96QP1 1244 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 OR2M2Q96R28 347 aa12.32□□□□□ -0.44
CCM2-217ENST00000492883 LINC00470Q9BZP3 86 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms