RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 PLK3Q9H4B4 646 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 ZNF442Q9H7R0 627 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 GPR35Q9HC97 309 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 CA10Q9NS85 328 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 B3GNT2Q9NY97 397 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 CCDC167Q9P0B6 97 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 KLHL14Q9P2G3 628 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 POU2F3Q9UKI9 436 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 CORINQ9Y5Q5 1042 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 PMF1-BGLAPU3KQ54 211 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 ZNF503-AS2A6NEH8 195 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 PRORSD1PA6NEY8 169 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 A8MV72 311 aaPredicted RBP7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 B9A039 149 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 C5orf58C9J3I9 102 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 M0R082 166 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 NDUFS8O00217 210 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 NR5A2O00482 541 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 POLR3GO15318 223 aaPredicted RBP7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 LYPD3O95274 346 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 HPRP00739 348 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 CRYAAP02489 173 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 BGLAPP02818 100 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 TP53P04637 393 aaPredicted RBP7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 C8BP07358 591 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 IGFBP1P08833 259 aaPredicted RBP7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 CECR9P0C854 216 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 ZNF43P17038 809 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 GIFP27352 417 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 CALCRP30988 508 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 CLDN17P56750 224 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 STX1BP61266 288 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 ARF1P84077 181 aaKnown RBP7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 POU3F1Q03052 451 aaPredicted RBP7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 HGFACQ04756 655 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 ADIPOQQ15848 244 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 GLIPR1L2Q4G1C9 344 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 TTMPQ5BVD1 217 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 C6orf52Q5T4I8 152 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 NIPAL3Q6P499 406 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 KLHL24Q6TFL4 600 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 PXKQ7Z7A4 578 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 KRT73Q86Y46 540 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 PTOV1Q86YD1 416 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 C20orf196Q8IYI0 205 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 IL17RDQ8NFM7 739 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 OR4F15Q8NGB8 312 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 ZNF417Q8TAU3 575 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 LRRC8CQ8TDW0 803 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 HTRA1Q92743 480 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 SLC25A36Q96CQ1 311 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 SLC47A1Q96FL8 570 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 ALKBH3Q96Q83 286 aaPredicted RBP7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 ZNF587Q96SQ5 575 aaPredicted RBP7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 DOK1Q99704 481 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 CPPED1Q9BRF8 314 aaPredicted RBP7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 ZNF426Q9BUY5 554 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 SPATA5L1Q9BVQ7 753 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 PRR14Q9BWN1 585 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 PCDHAC1Q9H158 963 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 MYOZ1Q9NP98 299 aaPredicted RBP7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 YAE1D1Q9NRH1 226 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 TESQ9UGI8 421 aaKnown RBP7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 FBXO9Q9UK97 447 aaPredicted RBP7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 CORO2BQ9UQ03 480 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 ATP23Q9Y6H3 246 aa7.27□□□□□ -1.25
SMARCB1-207ENST00000491967 LOC390937A0A1W2PQ73 354 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 TMEM129A0AVI4 362 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 ZNF99A8MXY4 864 aaPredicted RBP7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 PLPP3O14495 311 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 SLC43A1O75387 559 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 SERPINB7O75635 380 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 KRT33AO76009 404 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 LY6HO94772 140 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 OR4A8P0C604 315 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 IGHV4-31P0DP07 118 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 HLA-DOBP13765 273 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 CDH2P19022 906 aaPredicted RBP7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 USF1P22415 310 aaPredicted RBP7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 SLC6A2P23975 617 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 GRPRP30550 384 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 ARR3P36575 388 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 PPOXP50336 477 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 GZMMP51124 257 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 AQP5P55064 265 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 UBE2NP61088 152 aaKnown RBP7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 RBBP4Q09028 425 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 SCARB2Q14108 478 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 SQLEQ14534 574 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 OR1Q1Q15612 314 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 CEACAM16Q2WEN9 425 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 AGKQ53H12 422 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 ALG10BQ5I7T1 473 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 PHYHD1Q5SRE7 291 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 HMBOX1Q6NT76 420 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 PODNL1Q6PEZ8 512 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 ZNF613Q6PF04 617 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 MYPOPQ86VE0 399 aaPredicted RBP7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 RETREG3Q86VR2 466 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 WDFY1Q8IWB7 410 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms