RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 TRIP10Q15642 601 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 DUSP7Q16829 419 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 ALG10BQ5I7T1 473 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 AGBL2Q5U5Z8 902 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 KRT80Q6KB66 452 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 NHLRC1Q6VVB1 395 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 LRP11Q86VZ4 500 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 CARM1Q86X55 608 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 MEX3DQ86XN8 651 aaKnown RBP7.72□□□□□ -1.17
HDAC3-211ENST00000491581 HIPK1Q86Z02 1210 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 CDK20Q8IZL9 346 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 GOLGA6L1Q8N7Z2 621 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 C1orf162Q8NEQ5 155 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-211ENST00000491581 MFSD8Q8NHS3 518 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 BBS10Q8TAM1 723 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 LRRC8CQ8TDW0 803 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 OIT3Q8WWZ8 545 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 ADAD1Q96M93 576 aaKnown RBP7.72□□□□□ -1.17
HDAC3-211ENST00000491581 C7orf26Q96N11 449 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 SF3B5Q9BWJ5 86 aaKnown RBP7.72□□□□□ -1.17
HDAC3-211ENST00000491581 GRIP2Q9C0E4 1043 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 TPK1Q9H3S4 243 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 ZNF385DQ9H6B1 395 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 CRLF2Q9HC73 371 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 CA10Q9NS85 328 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 FAIMQ9NVQ4 179 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 TMEM45AQ9NWC5 275 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 PARPBPQ9NWS1 579 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 ZNF224Q9NZL3 707 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 CALML5Q9NZT1 146 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 MYEF2Q9P2K5 600 aaKnown RBP7.72□□□□□ -1.17
HDAC3-211ENST00000491581 ZNF232Q9UNY5 417 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 MGAT4BQ9UQ53 548 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 ABCA1O95477 2261 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 PLCE1Q9P212 2302 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 VWC2LB2RUY7 222 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 MFN2O95140 757 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 IGLV1-44P01699 117 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 CCL2P13500 99 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 B4GALT1P15291 398 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 ZNF43P17038 809 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 FUT1P19526 365 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 TCN1P20061 433 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-211ENST00000491581 IGFBP5P24593 272 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 EFNA4P52798 201 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 RGS8P57771 180 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-211ENST00000491581 UBE2NP61088 152 aaKnown RBP7.71□□□□□ -1.18
HDAC3-211ENST00000491581 STX1BP61266 288 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 POU3F1Q03052 451 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-211ENST00000491581 MAD2L1BPQ15013 274 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-211ENST00000491581 ETFDHQ16134 617 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 NRF1Q16656 503 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 ALKBH6Q3KRA9 238 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 RUNDC3AQ59EK9 446 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 C6orf89Q6UWU4 347 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 MSANTD1Q6ZTZ1 278 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 SLC46A3Q7Z3Q1 461 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 DEPDC4Q8N2C3 294 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 C17orf78Q8N4C9 275 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 C10orf53Q8N6V4 93 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 POMGNT2Q8NAT1 580 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 OR6T1Q8NGN1 323 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 STK35Q8TDR2 534 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 MSI2Q96DH6 328 aaKnown RBP7.71□□□□□ -1.18
HDAC3-211ENST00000491581 ATP6V1G3Q96LB4 118 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 OXGR1Q96P68 337 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 KCNK17Q96T54 332 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 USB1Q9BQ65 265 aaKnown RBP7.71□□□□□ -1.18
HDAC3-211ENST00000491581 OR51B6Q9H340 312 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 FKRPQ9H9S5 495 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 NPHS2Q9NP85 383 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 RPS6KB2Q9UBS0 482 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 RASD1Q9Y272 281 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 IFT52Q9Y366 437 aa7.71□□□□□ -1.18
HDAC3-211ENST00000491581 SONP18583 2426 aaKnown RBP7.71□□□□□ -1.18
HDAC3-211ENST00000491581 TRAV36DV7A0A075B6V5 113 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 A0A087WUJ7 227 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 IGHV2OR16-5A0A0B4J2B6 119 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 A0A0B4J2E0 115 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 A0A1B0GX12 115 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 OR6C65A6NJZ3 312 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 RNF212BA8MTL3 300 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 hCG_2039718K7EN88 272 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 FBP2O00757 339 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 WNT9BO14905 357 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 PHF1O43189 567 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-211ENST00000491581 TMCC2O75069 709 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 SASH3O75995 380 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 WNT11O96014 354 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 F12P00748 615 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-211ENST00000491581 CD79AP11912 226 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 NQO1P15559 274 aaKnown RBP7.7□□□□□ -1.18
HDAC3-211ENST00000491581 GPX2P18283 190 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 FKBP2P26885 142 aaKnown RBP7.7□□□□□ -1.18
HDAC3-211ENST00000491581 GTF2E2P29084 291 aaKnown RBP7.7□□□□□ -1.18
HDAC3-211ENST00000491581 PRKAR1BP31321 381 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 SERPINF1P36955 418 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 SEC24CP53992 1094 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 MYBPC1Q00872 1141 aa7.7□□□□□ -1.18
HDAC3-211ENST00000491581 TGFBR3Q03167 851 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms