RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	TREM2	Q9NZC2	230 aa		13.12	□□□□□ -0.31
AGAP3-222	ENST00000490839	B3GAT1	Q9P2W7	334 aa		13.12	□□□□□ -0.31
AGAP3-222	ENST00000490839	FZD7	O75084	574 aa		13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	HPX	P02790	462 aa		13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	GSN	P06396	782 aa		13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	MYZAP	P0CAP1	466 aa		13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	NCF2	P19878	526 aa	Predicted RBP	13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	GLRX	P35754	106 aa		13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	RPS23	P62266	143 aa	Known RBP	13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	COX20	Q5RI15	118 aa		13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	THSD4	Q6ZMP0	1018 aa		13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	VRK2	Q86Y07	508 aa		13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	LRRC34	Q8IZ02	419 aa		13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	OR52P1P	Q8NH57	321 aa		13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	SLC25A36	Q96CQ1	311 aa		13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	ZNF837	Q96EG3	531 aa	Predicted RBP	13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	FAHD2A	Q96GK7	314 aa		13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	OXGR1	Q96P68	337 aa		13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	ZNF416	Q9BWM5	594 aa		13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	ZNF275	Q9NSD4	429 aa	Predicted RBP	13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	B3GNT2	Q9NY97	397 aa		13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	CALML5	Q9NZT1	146 aa		13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	P2RX2	Q9UBL9	471 aa		13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	NOX1	Q9Y5S8	564 aa		13.11	□□□□□ -0.31
AGAP3-222	ENST00000490839	WNT9B	O14905	357 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	PPIH	O43447	177 aa	Known RBP	13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	SEC14L2	O76054	403 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	HLA-H	P01893	362 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	PRG2	P13727	222 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	CREB1	P16220	341 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	TCN1	P20061	433 aa	Predicted RBP	13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	COL8A2	P25067	703 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	ALDH3B1	P43353	468 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	LMO4	P61968	165 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	LRRC74A	Q0VAA2	488 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	C1D	Q13901	141 aa	Known RBP	13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	LARS2	Q15031	903 aa	Known RBP	13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	MAPK11	Q15759	364 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	GSG1	Q2KHT4	349 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	PRR31	Q5SQ13	230 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	ATG16L1	Q676U5	607 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	ZNF621	Q6ZSS3	439 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	TMEM123	Q8N131	208 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	ZNF781	Q8N8C0	355 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	PNPT1	Q8TCS8	783 aa	Known RBP	13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	OR2M2	Q96R28	347 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	SYT3	Q9BQG1	590 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	SUCNR1	Q9BXA5	334 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	ZNF385D	Q9H6B1	395 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	ARMC7	Q9H6L4	198 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	LGALS13	Q9UHV8	139 aa		13.1	□□□□□ -0.31
AGAP3-222	ENST00000490839	AIM2	O14862	343 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	ITM2A	O43736	263 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	RP2	O75695	350 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	KRT75	O95678	551 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	ZNF35	P13682	527 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	ANPEP	P15144	967 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	ZNF14	P17017	642 aa	Predicted RBP	13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	LBP	P18428	481 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	CDKN2C	P42773	168 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	RPS5	P46782	204 aa	Known RBP	13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	CRISP3	P54108	245 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	MYBPC1	Q00872	1141 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	EGR4	Q05215	589 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	TRMT5	Q32P41	509 aa	Known RBP	13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	AWAT1	Q58HT5	328 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	C1QL2	Q7Z5L3	287 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	NUDCD3	Q8IVD9	361 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	KIF18A	Q8NI77	898 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	YIPF5	Q969M3	257 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	KTI12	Q96EK9	354 aa	Predicted RBP	13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	MS4A3	Q96HJ5	214 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	CACYBP	Q9HB71	228 aa	Known RBP	13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	SLC52A3	Q9NQ40	469 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	G6PC2	Q9NQR9	355 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	SEC14L4	Q9UDX3	406 aa		13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	ZNF346	Q9UL40	294 aa	Known RBP	13.09	□□□□□ -0.31
AGAP3-222	ENST00000490839	LOC105371242	A0A075B767	164 aa		13.08	□□□□□ -0.32
AGAP3-222	ENST00000490839	LOC102725191	A0A1B0GVB3	256 aa		13.08	□□□□□ -0.32
AGAP3-222	ENST00000490839		M0R082	166 aa		13.08	□□□□□ -0.32
AGAP3-222	ENST00000490839	TRAF3IP2	O43734	574 aa	Predicted RBP	13.08	□□□□□ -0.32
AGAP3-222	ENST00000490839	OR2T1	O43869	369 aa		13.08	□□□□□ -0.32
AGAP3-222	ENST00000490839	NCR1	O76036	304 aa		13.08	□□□□□ -0.32
AGAP3-222	ENST00000490839	SERPINE1	P05121	402 aa		13.08	□□□□□ -0.32
AGAP3-222	ENST00000490839	CD79A	P11912	226 aa		13.08	□□□□□ -0.32
AGAP3-222	ENST00000490839	ETV4	P43268	484 aa		13.08	□□□□□ -0.32
AGAP3-222	ENST00000490839	SEC24C	P53992	1094 aa		13.08	□□□□□ -0.32
AGAP3-222	ENST00000490839	GALK2	Q01415	458 aa		13.08	□□□□□ -0.32
AGAP3-222	ENST00000490839	MAD2L1BP	Q15013	274 aa	Predicted RBP	13.08	□□□□□ -0.32
AGAP3-222	ENST00000490839	CHI3L2	Q15782	390 aa		13.08	□□□□□ -0.32
AGAP3-222	ENST00000490839	FXN	Q16595	210 aa		13.08	□□□□□ -0.32
AGAP3-222	ENST00000490839	ZNF311	Q5JNZ3	666 aa		13.08	□□□□□ -0.32
AGAP3-222	ENST00000490839	FAM69A	Q5T7M9	428 aa		13.08	□□□□□ -0.32
AGAP3-222	ENST00000490839	GKAP1	Q5VSY0	366 aa	Predicted RBP	13.08	□□□□□ -0.32
AGAP3-222	ENST00000490839	C5orf46	Q6UWT4	87 aa		13.08	□□□□□ -0.32
AGAP3-222	ENST00000490839	C6orf89	Q6UWU4	347 aa		13.08	□□□□□ -0.32
AGAP3-222	ENST00000490839	ZNF627	Q7L945	461 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms