RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 CLEC12AQ5QGZ9 265 aa12.72□□□□□ -0.37
CLDN11-209ENST00000489485 NSUN5P2Q63ZY6 315 aa12.72□□□□□ -0.37
CLDN11-209ENST00000489485 ZNF620Q6ZNG0 422 aa12.72□□□□□ -0.37
CLDN11-209ENST00000489485 SCAIQ8N9R8 606 aa12.72□□□□□ -0.37
CLDN11-209ENST00000489485 FANK1Q8TC84 345 aa12.72□□□□□ -0.37
CLDN11-209ENST00000489485 ABHD3Q8WU67 409 aa12.72□□□□□ -0.37
CLDN11-209ENST00000489485 CYGBQ8WWM9 190 aa12.72□□□□□ -0.37
CLDN11-209ENST00000489485 PHF3Q92576 2039 aaKnown RBP12.72□□□□□ -0.37
CLDN11-209ENST00000489485 PCNX1Q96RV3 2341 aa12.72□□□□□ -0.37
CLDN11-209ENST00000489485 MBOAT4Q96T53 435 aa12.72□□□□□ -0.37
CLDN11-209ENST00000489485 OR52D1Q9H346 318 aa12.72□□□□□ -0.37
CLDN11-209ENST00000489485 CALHM2Q9HA72 323 aa12.72□□□□□ -0.37
CLDN11-209ENST00000489485 MRPL39Q9NYK5 338 aaKnown RBP12.72□□□□□ -0.37
CLDN11-209ENST00000489485 IL20Q9NYY1 176 aa12.72□□□□□ -0.37
CLDN11-209ENST00000489485 ZNF175Q9Y473 711 aa12.72□□□□□ -0.37
CLDN11-209ENST00000489485 CD8B2A6NJW9 211 aa12.71□□□□□ -0.37
CLDN11-209ENST00000489485 AQP7P3A6NL99 342 aa12.71□□□□□ -0.37
CLDN11-209ENST00000489485 H0YJX3 145 aa12.71□□□□□ -0.37
CLDN11-209ENST00000489485 PLGP00747 810 aaPredicted RBP12.71□□□□□ -0.37
CLDN11-209ENST00000489485 FCGR2AP12318 317 aa12.71□□□□□ -0.37
CLDN11-209ENST00000489485 CA7P43166 264 aa12.71□□□□□ -0.37
CLDN11-209ENST00000489485 CRISP1P54107 249 aa12.71□□□□□ -0.37
CLDN11-209ENST00000489485 ESRRGP62508 458 aa12.71□□□□□ -0.37
CLDN11-209ENST00000489485 PTGES3Q15185 160 aaKnown RBP12.71□□□□□ -0.37
CLDN11-209ENST00000489485 C6orf52Q5T4I8 152 aa12.71□□□□□ -0.37
CLDN11-209ENST00000489485 TMEM236Q5W0B7 351 aa12.71□□□□□ -0.37
CLDN11-209ENST00000489485 SMARCD3Q6STE5 483 aa12.71□□□□□ -0.37
CLDN11-209ENST00000489485 MCEMP1Q8IX19 187 aa12.71□□□□□ -0.37
CLDN11-209ENST00000489485 SAMD8Q96LT4 415 aa12.71□□□□□ -0.37
CLDN11-209ENST00000489485 RDH12Q96NR8 316 aa12.71□□□□□ -0.37
CLDN11-209ENST00000489485 GABARAPL3Q9BY60 117 aa12.71□□□□□ -0.37
CLDN11-209ENST00000489485 MCCC2Q9HCC0 563 aa12.71□□□□□ -0.37
CLDN11-209ENST00000489485 ENOPH1Q9UHY7 261 aa12.71□□□□□ -0.37
CLDN11-209ENST00000489485 HIVEP3Q5T1R4 2406 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 C11orf98E9PRG8 122 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 PLPP3O14495 311 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 RNF13O43567 381 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 SERPINI2O75830 405 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 RCBTB2O95199 551 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 AQP2P41181 271 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 PER3P56645 1201 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 RPS4XP62701 263 aaKnown RBP12.7□□□□□ -0.38
CLDN11-209ENST00000489485 PUDPQ08623 228 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 RASGEF1BQ0VAM2 473 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 PMPCAQ10713 525 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 GTF2IRD2BQ6EKJ0 949 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 THSD4Q6ZMP0 1018 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 GTF2IRD2Q86UP8 949 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 IGFN1Q86VF2 1251 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 GCNT2Q8N0V5 402 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 SLC43A2Q8N370 569 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 DHRSXQ8N5I4 330 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 OR8D4Q8NGM9 314 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 MOSPD2Q8NHP6 518 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 RNF128Q8TEB7 428 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 WNT2BQ93097 391 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 TM9SF2Q99805 663 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 TTYH2Q9BSA4 534 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 ADI1Q9BV57 179 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 GRIP2Q9C0E4 1043 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 FAM118AQ9NWS6 357 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 TAS2R5Q9NYW4 299 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 HIF3AQ9Y2N7 669 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 CDH10Q9Y6N8 788 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 MYO18BQ8IUG5 2567 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 CCL21O00585 134 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 CYTIPO60759 359 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 VAMP5O95183 116 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 CLIC3O95833 236 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 IL2RAP01589 272 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 F13BP05160 661 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 STSP08842 583 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 P2RY4P51582 365 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 PRPS1P60891 318 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 RPL18Q07020 188 aaKnown RBP12.7□□□□□ -0.38
CLDN11-209ENST00000489485 FJX1Q86VR8 437 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 IQCF1Q8N6M8 205 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 C9orf106Q8NAJ2 232 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 TEX47Q8TBZ9 253 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 ZNF775Q96BV0 537 aaPredicted RBP12.7□□□□□ -0.38
CLDN11-209ENST00000489485 TSSK6Q9BXA6 273 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 RNF122Q9H9V4 155 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 TBC1D23Q9NUY8 699 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 KLHL9Q9P2J3 617 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 SCOCQ9UIL1 159 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 CLEC4AQ9UMR7 237 aa12.7□□□□□ -0.38
CLDN11-209ENST00000489485 DIDO1Q9BTC0 2240 aaKnown RBP12.7□□□□□ -0.38
CLDN11-209ENST00000489485 INTS1Q8N201 2190 aaKnown RBP12.69□□□□□ -0.38
CLDN11-209ENST00000489485 LOC100130705A0A1B0GUX0 176 aa12.69□□□□□ -0.38
CLDN11-209ENST00000489485 MBD3L4A6NDZ8 208 aaPredicted RBP12.69□□□□□ -0.38
CLDN11-209ENST00000489485 MBD3L3A6NE82 208 aaPredicted RBP12.69□□□□□ -0.38
CLDN11-209ENST00000489485 MBD3L5A6NJ08 208 aaPredicted RBP12.69□□□□□ -0.38
CLDN11-209ENST00000489485 E9PLN8 166 aa12.69□□□□□ -0.38
CLDN11-209ENST00000489485 MS4A18H0YCH9 400 aa12.69□□□□□ -0.38
CLDN11-209ENST00000489485 FZD7O75084 574 aa12.69□□□□□ -0.38
CLDN11-209ENST00000489485 NDUFB2O95178 105 aa12.69□□□□□ -0.38
CLDN11-209ENST00000489485 ZNF43P17038 809 aa12.69□□□□□ -0.38
CLDN11-209ENST00000489485 UQCRC1P31930 480 aa12.69□□□□□ -0.38
CLDN11-209ENST00000489485 RPL4P36578 427 aaKnown RBP12.69□□□□□ -0.38
CLDN11-209ENST00000489485 GIPRP48546 466 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms