RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 MGAT4BQ9UQ53 548 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 B3GALT5Q9Y2C3 310 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 TLN2Q9Y4G6 2542 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 LOC100653049A0A140TA62 436 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 RNF223E7ERA6 249 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 FXYD1O00168 92 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 KPNA4O00629 521 aaPredicted RBP12.24□□□□□ -0.45
VTI1A-206ENST00000489142 MRASO14807 208 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 TRAF3IP2O43734 574 aaPredicted RBP12.24□□□□□ -0.45
VTI1A-206ENST00000489142 OR2T1O43869 369 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 TMCC2O75069 709 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 FZD7O75084 574 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 SLC43A1O75387 559 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 KRT34O76011 436 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 ZNF432O94892 652 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 THY1P04216 161 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 TNFRSF1BP20333 461 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 TTKP33981 857 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 CRYBA2P53672 197 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 POU3F1Q03052 451 aaPredicted RBP12.24□□□□□ -0.45
VTI1A-206ENST00000489142 NRF1Q16656 503 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 MMEL1Q495T6 779 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 PHYHD1Q5SRE7 291 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 AGAP6Q5VW22 663 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 HMBOX1Q6NT76 420 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 C5orf46Q6UWT4 87 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 ALPK2Q86TB3 2170 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 DEPDC4Q8N2C3 294 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 GPR137CQ8N3F9 429 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 SLC26A7Q8TE54 656 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 BCL2L2Q92843 193 aaPredicted RBP12.24□□□□□ -0.45
VTI1A-206ENST00000489142 HS6ST2Q96MM7 605 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 OR2M2Q96R28 347 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 EMC6Q9BV81 110 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 CACNG6Q9BXT2 260 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 NELFAQ9H3P2 528 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 SEC61A2Q9H9S3 476 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 GPR35Q9HC97 309 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 SAR1AQ9NR31 198 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 MED29Q9NX70 200 aa12.24□□□□□ -0.45
VTI1A-206ENST00000489142 FN1P02751 2386 aaKnown RBP12.23□□□□□ -0.45
VTI1A-206ENST00000489142 IGHV1-18A0A0C4DH31 117 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 C11orf98E9PRG8 122 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 M0R3G1 203 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 SHOX2O60902 331 aaPredicted RBP12.23□□□□□ -0.45
VTI1A-206ENST00000489142 LYPD3O95274 346 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 WNT11O96014 354 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 PCSK6P29122 969 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 UBE2NP61088 152 aaKnown RBP12.23□□□□□ -0.45
VTI1A-206ENST00000489142 ARF1P84077 181 aaKnown RBP12.23□□□□□ -0.45
VTI1A-206ENST00000489142 PMS2P3Q13401 168 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 CYLC2Q14093 348 aaPredicted RBP12.23□□□□□ -0.45
VTI1A-206ENST00000489142 VMACQ2NL98 169 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 CEACAM16Q2WEN9 425 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 C11orf71Q6IPW1 123 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 PATL1Q86TB9 770 aaKnown RBP12.23□□□□□ -0.45
VTI1A-206ENST00000489142 MYPOPQ86VE0 399 aaPredicted RBP12.23□□□□□ -0.45
VTI1A-206ENST00000489142 UEVLDQ8IX04 471 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 FBXL14Q8N1E6 418 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 MUC15Q8N387 334 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 ADAMTS16Q8TE57 1224 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 LRRC58Q96CX6 371 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 TXNDC15Q96J42 360 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 EPYCQ99645 322 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 ASPNQ9BXN1 380 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 LINC00470Q9BZP3 86 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 CBLN4Q9NTU7 201 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 ARMCX1Q9P291 453 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 SLC7A7Q9UM01 511 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 RCE1Q9Y256 329 aa12.23□□□□□ -0.45
VTI1A-206ENST00000489142 ZNF503-AS2A6NEH8 195 aa12.22□□□□□ -0.45
VTI1A-206ENST00000489142 CHP2O43745 196 aa12.22□□□□□ -0.45
VTI1A-206ENST00000489142 SSX4O60224 188 aa12.22□□□□□ -0.45
VTI1A-206ENST00000489142 CELA3BP08861 270 aa12.22□□□□□ -0.45
VTI1A-206ENST00000489142 AHCYP23526 432 aa12.22□□□□□ -0.45
VTI1A-206ENST00000489142 ANKRD16Q6P6B7 361 aa12.22□□□□□ -0.45
VTI1A-206ENST00000489142 ZNF613Q6PF04 617 aa12.22□□□□□ -0.45
VTI1A-206ENST00000489142 CALHM3Q86XJ0 350 aa12.22□□□□□ -0.45
VTI1A-206ENST00000489142 TMEM123Q8N131 208 aa12.22□□□□□ -0.45
VTI1A-206ENST00000489142 POU5F2Q8N7G0 328 aa12.22□□□□□ -0.45
VTI1A-206ENST00000489142 SLC41A3Q96GZ6 507 aa12.22□□□□□ -0.45
VTI1A-206ENST00000489142 SLC38A2Q96QD8 506 aa12.22□□□□□ -0.45
VTI1A-206ENST00000489142 ECSITQ9BQ95 431 aa12.22□□□□□ -0.45
VTI1A-206ENST00000489142 TMEM43Q9BTV4 400 aa12.22□□□□□ -0.45
VTI1A-206ENST00000489142 FKRPQ9H9S5 495 aa12.22□□□□□ -0.45
VTI1A-206ENST00000489142 CRLF2Q9HC73 371 aa12.22□□□□□ -0.45
VTI1A-206ENST00000489142 GMPR2Q9P2T1 348 aaKnown RBP12.22□□□□□ -0.45
VTI1A-206ENST00000489142 NAV3Q8IVL0 2385 aa12.22□□□□□ -0.45
VTI1A-206ENST00000489142 CSPG4Q6UVK1 2322 aa12.22□□□□□ -0.45
VTI1A-206ENST00000489142 OR6C65A6NJZ3 312 aa12.21□□□□□ -0.45
VTI1A-206ENST00000489142 FAM171A2A8MVW0 826 aa12.21□□□□□ -0.45
VTI1A-206ENST00000489142 PLPP3O14495 311 aa12.21□□□□□ -0.45
VTI1A-206ENST00000489142 FMO6PO60774 539 aa12.21□□□□□ -0.45
VTI1A-206ENST00000489142 CH25HO95992 272 aa12.21□□□□□ -0.45
VTI1A-206ENST00000489142 C8BP07358 591 aa12.21□□□□□ -0.45
VTI1A-206ENST00000489142 CECR9P0C854 216 aa12.21□□□□□ -0.45
VTI1A-206ENST00000489142 PUDPQ08623 228 aa12.21□□□□□ -0.45
VTI1A-206ENST00000489142 CAMK2DQ13557 499 aa12.21□□□□□ -0.45
VTI1A-206ENST00000489142 MFSD13AQ14CX5 517 aa12.21□□□□□ -0.45
VTI1A-206ENST00000489142 SWT1Q5T5J6 900 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms