RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ARMCX1Q9P291 453 aa21.87■■□□□ 1.09
HMGN1-217ENST00000489072 CAPN7Q9Y6W3 813 aa21.87■■□□□ 1.09
HMGN1-217ENST00000489072 CSPG4Q6UVK1 2322 aa21.86■■□□□ 1.09
HMGN1-217ENST00000489072 LOC102725191A0A1B0GVB3 256 aa21.86■■□□□ 1.09
HMGN1-217ENST00000489072 E7EQL1 145 aa21.86■■□□□ 1.09
HMGN1-217ENST00000489072 H7C1Q1 480 aa21.86■■□□□ 1.09
HMGN1-217ENST00000489072 CHP2O43745 196 aa21.86■■□□□ 1.09
HMGN1-217ENST00000489072 HLA-DOBP13765 273 aa21.86■■□□□ 1.09
HMGN1-217ENST00000489072 CDKN1AP38936 164 aa21.86■■□□□ 1.09
HMGN1-217ENST00000489072 C1DQ13901 141 aaKnown RBP21.86■■□□□ 1.09
HMGN1-217ENST00000489072 MFSD13AQ14CX5 517 aa21.86■■□□□ 1.09
HMGN1-217ENST00000489072 TBRG1Q3YBR2 411 aa21.86■■□□□ 1.09
HMGN1-217ENST00000489072 SLC22A25Q6T423 547 aa21.86■■□□□ 1.09
HMGN1-217ENST00000489072 B3GLCTQ6Y288 498 aa21.86■■□□□ 1.09
HMGN1-217ENST00000489072 BIVMQ86UB2 503 aa21.86■■□□□ 1.09
HMGN1-217ENST00000489072 DTX2Q86UW9 622 aa21.86■■□□□ 1.09
HMGN1-217ENST00000489072 SLC26A7Q8TE54 656 aa21.86■■□□□ 1.09
HMGN1-217ENST00000489072 RADILQ96JH8 1075 aa21.86■■□□□ 1.09
HMGN1-217ENST00000489072 COX4I2Q96KJ9 171 aa21.86■■□□□ 1.09
HMGN1-217ENST00000489072 ZNF583Q96ND8 569 aa21.86■■□□□ 1.09
HMGN1-217ENST00000489072 TRAF4Q9BUZ4 470 aaPredicted RBP21.86■■□□□ 1.09
HMGN1-217ENST00000489072 CORINQ9Y5Q5 1042 aa21.86■■□□□ 1.09
HMGN1-217ENST00000489072 PRPS1P60891 318 aa21.85■■□□□ 1.09
HMGN1-217ENST00000489072 IL1RL1Q01638 556 aa21.85■■□□□ 1.09
HMGN1-217ENST00000489072 ROR2Q01974 943 aaKnown RBP21.85■■□□□ 1.09
HMGN1-217ENST00000489072 POU5F2Q8N7G0 328 aa21.85■■□□□ 1.09
HMGN1-217ENST00000489072 SCAIQ8N9R8 606 aa21.85■■□□□ 1.09
HMGN1-217ENST00000489072 ADAMTS16Q8TE57 1224 aa21.85■■□□□ 1.09
HMGN1-217ENST00000489072 BCL2L2Q92843 193 aaPredicted RBP21.85■■□□□ 1.09
HMGN1-217ENST00000489072 OR2M2Q96R28 347 aa21.85■■□□□ 1.09
HMGN1-217ENST00000489072 NELFAQ9H3P2 528 aa21.85■■□□□ 1.09
HMGN1-217ENST00000489072 SLC43A1O75387 559 aa21.84■■□□□ 1.09
HMGN1-217ENST00000489072 NQO1P15559 274 aaKnown RBP21.84■■□□□ 1.09
HMGN1-217ENST00000489072 C1QTNF12Q5T7M4 302 aa21.84■■□□□ 1.09
HMGN1-217ENST00000489072 KLHL24Q6TFL4 600 aa21.84■■□□□ 1.09
HMGN1-217ENST00000489072 NHLRC1Q6VVB1 395 aa21.84■■□□□ 1.09
HMGN1-217ENST00000489072 TMEM123Q8N131 208 aa21.84■■□□□ 1.09
HMGN1-217ENST00000489072 C10orf53Q8N6V4 93 aa21.84■■□□□ 1.09
HMGN1-217ENST00000489072 GTPBP3Q969Y2 492 aaKnown RBP21.84■■□□□ 1.09
HMGN1-217ENST00000489072 RCN3Q96D15 328 aa21.84■■□□□ 1.09
HMGN1-217ENST00000489072 ASPNQ9BXN1 380 aa21.84■■□□□ 1.09
HMGN1-217ENST00000489072 PCDHAC1Q9H158 963 aa21.84■■□□□ 1.09
HMGN1-217ENST00000489072 MRPL39Q9NYK5 338 aaKnown RBP21.84■■□□□ 1.09
HMGN1-217ENST00000489072 NAV3Q8IVL0 2385 aa21.83■■□□□ 1.09
HMGN1-217ENST00000489072 TRAPPC13A5PLN9 417 aa21.83■■□□□ 1.09
HMGN1-217ENST00000489072 RPL36A-HNRNPH2H7BZ11 118 aa21.83■■□□□ 1.09
HMGN1-217ENST00000489072 SLC22A2O15244 555 aa21.83■■□□□ 1.09
HMGN1-217ENST00000489072 WNT11O96014 354 aa21.83■■□□□ 1.09
HMGN1-217ENST00000489072 TNFRSF1BP20333 461 aa21.83■■□□□ 1.09
HMGN1-217ENST00000489072 PMS2P3Q13401 168 aa21.83■■□□□ 1.09
HMGN1-217ENST00000489072 VEZF1Q14119 521 aa21.83■■□□□ 1.09
HMGN1-217ENST00000489072 HMBOX1Q6NT76 420 aa21.83■■□□□ 1.09
HMGN1-217ENST00000489072 WDFY1Q8IWB7 410 aa21.83■■□□□ 1.09
HMGN1-217ENST00000489072 UEVLDQ8IX04 471 aa21.83■■□□□ 1.09
HMGN1-217ENST00000489072 PCYOX1LQ8NBM8 494 aa21.83■■□□□ 1.09
HMGN1-217ENST00000489072 RASSF5Q8WWW0 418 aa21.83■■□□□ 1.09
HMGN1-217ENST00000489072 ZNF837Q96EG3 531 aaPredicted RBP21.83■■□□□ 1.09
HMGN1-217ENST00000489072 BDH2Q9BUT1 245 aa21.83■■□□□ 1.09
HMGN1-217ENST00000489072 GPR35Q9HC97 309 aa21.83■■□□□ 1.09
HMGN1-217ENST00000489072 OBP2BQ9NPH6 170 aa21.83■■□□□ 1.09
HMGN1-217ENST00000489072 GID8Q9NWU2 228 aa21.83■■□□□ 1.09
HMGN1-217ENST00000489072 POU2F3Q9UKI9 436 aa21.83■■□□□ 1.09
HMGN1-217ENST00000489072 SLC7A7Q9UM01 511 aa21.83■■□□□ 1.09
HMGN1-217ENST00000489072 A0A096LPE4 126 aa21.82■■□□□ 1.08
HMGN1-217ENST00000489072 A0A1W2PPZ6 126 aa21.82■■□□□ 1.08
HMGN1-217ENST00000489072 PLPP3O14495 311 aa21.82■■□□□ 1.08
HMGN1-217ENST00000489072 POU3F1Q03052 451 aaPredicted RBP21.82■■□□□ 1.08
HMGN1-217ENST00000489072 PUDPQ08623 228 aa21.82■■□□□ 1.08
HMGN1-217ENST00000489072 PHYHD1Q5SRE7 291 aa21.82■■□□□ 1.08
HMGN1-217ENST00000489072 ERICH5Q6P6B1 374 aa21.82■■□□□ 1.08
HMGN1-217ENST00000489072 CARM1Q86X55 608 aa21.82■■□□□ 1.08
HMGN1-217ENST00000489072 TXNDC15Q96J42 360 aa21.82■■□□□ 1.08
HMGN1-217ENST00000489072 DHRS9Q9BPW9 319 aa21.82■■□□□ 1.08
HMGN1-217ENST00000489072 EMC6Q9BV81 110 aa21.82■■□□□ 1.08
HMGN1-217ENST00000489072 GRIP2Q9C0E4 1043 aa21.82■■□□□ 1.08
HMGN1-217ENST00000489072 FAIMQ9NVQ4 179 aa21.82■■□□□ 1.08
HMGN1-217ENST00000489072 FAM220BPB1ANY3 271 aa21.81■■□□□ 1.08
HMGN1-217ENST00000489072 SMAD7O15105 426 aaKnown RBP21.81■■□□□ 1.08
HMGN1-217ENST00000489072 NDUFS7O75251 213 aa21.81■■□□□ 1.08
HMGN1-217ENST00000489072 MT-ATP6P00846 226 aa21.81■■□□□ 1.08
HMGN1-217ENST00000489072 SH3BGRP55822 239 aaPredicted RBP21.81■■□□□ 1.08
HMGN1-217ENST00000489072 TUBA1BP68363 451 aa21.81■■□□□ 1.08
HMGN1-217ENST00000489072 TUBA4AP68366 448 aa21.81■■□□□ 1.08
HMGN1-217ENST00000489072 ARF1P84077 181 aaKnown RBP21.81■■□□□ 1.08
HMGN1-217ENST00000489072 ANKRD16Q6P6B7 361 aa21.81■■□□□ 1.08
HMGN1-217ENST00000489072 Q71RC1 249 aaPredicted RBP21.81■■□□□ 1.08
HMGN1-217ENST00000489072 TUBA1AQ71U36 451 aa21.81■■□□□ 1.08
HMGN1-217ENST00000489072 GPR137CQ8N3F9 429 aa21.81■■□□□ 1.08
HMGN1-217ENST00000489072 ANKK1Q8NFD2 765 aa21.81■■□□□ 1.08
HMGN1-217ENST00000489072 MAGEE2Q8TD90 523 aaPredicted RBP21.81■■□□□ 1.08
HMGN1-217ENST00000489072 PROX1Q92786 737 aa21.81■■□□□ 1.08
HMGN1-217ENST00000489072 TRMT61AQ96FX7 289 aaKnown RBP21.81■■□□□ 1.08
HMGN1-217ENST00000489072 PRSS27Q9BQR3 290 aa21.81■■□□□ 1.08
HMGN1-217ENST00000489072 ZNF426Q9BUY5 554 aa21.81■■□□□ 1.08
HMGN1-217ENST00000489072 ALG2Q9H553 416 aa21.81■■□□□ 1.08
HMGN1-217ENST00000489072 MED29Q9NX70 200 aa21.81■■□□□ 1.08
HMGN1-217ENST00000489072 GMPR2Q9P2T1 348 aaKnown RBP21.81■■□□□ 1.08
HMGN1-217ENST00000489072 SH3GLB1Q9Y371 365 aa21.81■■□□□ 1.08
HMGN1-217ENST00000489072 ARPC4-TTLL3A0A0A6YYG9 625 aa21.8■■□□□ 1.08
HMGN1-217ENST00000489072 IGHV1-18A0A0C4DH31 117 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms