RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 SAV1Q9H4B6 383 aaPredicted RBP2.83□□□□□ -1.96
PRPF4-203ENST00000488937 ATP13A3Q9H7F0 1226 aa2.83□□□□□ -1.96
PRPF4-203ENST00000488937 WDR54Q9H977 334 aa2.83□□□□□ -1.96
PRPF4-203ENST00000488937 PATZ1Q9HBE1 687 aaKnown RBP2.83□□□□□ -1.96
PRPF4-203ENST00000488937 MEPEQ9NQ76 525 aaPredicted RBP2.83□□□□□ -1.96
PRPF4-203ENST00000488937 INTS9Q9NV88 658 aaKnown RBP2.83□□□□□ -1.96
PRPF4-203ENST00000488937 RMND1Q9NWS8 449 aa2.83□□□□□ -1.96
PRPF4-203ENST00000488937 MAT2BQ9NZL9 334 aa2.83□□□□□ -1.96
PRPF4-203ENST00000488937 ZNF282Q9UDV7 671 aaPredicted RBP2.83□□□□□ -1.96
PRPF4-203ENST00000488937 ICAM5Q9UMF0 924 aa2.83□□□□□ -1.96
PRPF4-203ENST00000488937 YARS2Q9Y2Z4 477 aaKnown RBP2.83□□□□□ -1.96
PRPF4-203ENST00000488937 MRPS18CQ9Y3D5 142 aaKnown RBP2.83□□□□□ -1.96
PRPF4-203ENST00000488937 RLFQ13129 1914 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 TRBV5-4A0A0C4DH59 114 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 A0A1B0GTH9 108 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 NEDD8-MDP1E9PL57 170 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 BLOC1S5-TXNDC5H3BN57 136 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 PRMT5O14744 637 aaPredicted RBP2.82□□□□□ -1.96
PRPF4-203ENST00000488937 TYROBPO43914 113 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 SLC19A2O60779 497 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 DUSP11O75319 330 aaKnown RBP2.82□□□□□ -1.96
PRPF4-203ENST00000488937 FRAT2O75474 233 aaPredicted RBP2.82□□□□□ -1.96
PRPF4-203ENST00000488937 CEACAM4O75871 244 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 ATP5HO75947 161 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 OR5F1O95221 314 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 ACTL6AO96019 429 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 LGALS2P05162 132 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 GP1BAP07359 652 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 HOXD4P09016 255 aaPredicted RBP2.82□□□□□ -1.96
PRPF4-203ENST00000488937 UBTFL1P0CB47 393 aaPredicted RBP2.82□□□□□ -1.96
PRPF4-203ENST00000488937 OCMP0CE72 109 aaPredicted RBP2.82□□□□□ -1.96
PRPF4-203ENST00000488937 SLC35E2BP0CK96 405 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 PSKH1P11801 424 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 SELEP16581 610 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 HTR2CP28335 458 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 FGF9P31371 208 aaPredicted RBP2.82□□□□□ -1.96
PRPF4-203ENST00000488937 CEACAM8P31997 349 aaPredicted RBP2.82□□□□□ -1.96
PRPF4-203ENST00000488937 ACVR1BP36896 505 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 PTGDSP41222 190 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 TFPI2P48307 235 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 CSNK1A1P48729 337 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 TGM4P49221 684 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 PDLIM4P50479 330 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 FBXW4P57775 412 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 LINC00205P59089 165 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 ZNF33AQ06730 810 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 ST3GAL3Q11203 375 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 TRAF2Q12933 501 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 EMC2Q15006 297 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 QRICH1Q2TAL8 776 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 VAX1Q5SQQ9 334 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 TPRG1LQ5T0D9 272 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 OR8G2PQ6IF36 304 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 FAM173BQ6P4H8 233 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 CLEC18BQ6UXF7 455 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 FAM151BQ6UXP7 276 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 ZNF621Q6ZSS3 439 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 PRSS48Q7RTY5 328 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 ZNF546Q86UE3 836 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 SFR1Q86XK3 245 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 LRRC34Q8IZ02 419 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 NECAP1Q8NC96 275 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 NOXO1Q8NFA2 376 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 OR5T2Q8NGG2 359 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 OR10G8Q8NGN5 311 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 RPLP0P6Q8NHW5 317 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 FANK1Q8TC84 345 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 IL1F10Q8WWZ1 152 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 ING5Q8WYH8 240 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 GTF3AQ92664 365 aaKnown RBP2.82□□□□□ -1.96
PRPF4-203ENST00000488937 TMEM143Q96AN5 459 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 DUS3LQ96G46 650 aaKnown RBP2.82□□□□□ -1.96
PRPF4-203ENST00000488937 CELF6Q96J87 481 aaKnown RBP2.82□□□□□ -1.96
PRPF4-203ENST00000488937 RNF170Q96K19 258 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 SERPINB11Q96P15 392 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 ZNF251Q9BRH9 671 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 C9orf16Q9BUW7 83 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 PITPNM3Q9BZ71 974 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 DERL2Q9GZP9 239 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 NAT10Q9H0A0 1025 aaKnown RBP2.82□□□□□ -1.96
PRPF4-203ENST00000488937 PPDPFQ9H3Y8 114 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 PIGUQ9H490 435 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 REEP4Q9H6H4 257 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 NT5DC2Q9H857 520 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 PLEKHA3Q9HB20 300 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 SLC38A10Q9HBR0 1119 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 ANKHQ9HCJ1 492 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 ESM1Q9NQ30 184 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.82□□□□□ -1.96
PRPF4-203ENST00000488937 EHFQ9NZC4 300 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 NUDT4Q9NZJ9 180 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 MDFICQ9P1T7 246 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 KLK11Q9UBX7 282 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 KCNG2Q9UJ96 466 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 LSM7Q9UK45 103 aaKnown RBP2.82□□□□□ -1.96
PRPF4-203ENST00000488937 POU2F3Q9UKI9 436 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 RCL1Q9Y2P8 373 aaKnown RBP2.82□□□□□ -1.96
PRPF4-203ENST00000488937 KCNIP3Q9Y2W7 256 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 HYOU1Q9Y4L1 999 aa2.82□□□□□ -1.96
PRPF4-203ENST00000488937 USP42Q9H9J4 1324 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms