RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ADORA2BP29275 332 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 OR1G1P47890 313 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 RPL29P47914 159 aaKnown RBP2.95□□□□□ -1.94
ITGB1-214ENST00000488427 VLDLRP98155 873 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 LRRC36Q1X8D7 754 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 SPATA46Q5T0L3 261 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 C12orf60Q5U649 245 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 IRGCQ6NXR0 463 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 RBM43Q6ZSC3 357 aaKnown RBP2.95□□□□□ -1.94
ITGB1-214ENST00000488427 TMEM26Q6ZUK4 368 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 SERPINA9Q86WD7 417 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 OR56B1Q8NGI3 324 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 OR52E1Q8NGJ3 308 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 PSMG2Q969U7 264 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 UPRTQ96BW1 309 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 IL4I1Q96RQ9 567 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 RAB17Q9H0T7 212 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 RSPH9Q9H1X1 276 aaPredicted RBP2.95□□□□□ -1.94
ITGB1-214ENST00000488427 NANSQ9NR45 359 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 CNOT2Q9NZN8 540 aaKnown RBP2.95□□□□□ -1.94
ITGB1-214ENST00000488427 ATP6V1HQ9UI12 483 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 CYTH4Q9UIA0 394 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 KLF2Q9Y5W3 355 aaPredicted RBP2.95□□□□□ -1.94
ITGB1-214ENST00000488427 UNC13CQ8NB66 2214 aa2.95□□□□□ -1.94
ITGB1-214ENST00000488427 IGHV1OR15-9A0A0B4J2B8 117 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 H0YL77 283 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 ZNF254O75437 659 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 NMT1P30419 496 aaKnown RBP2.94□□□□□ -1.94
ITGB1-214ENST00000488427 AXLP30530 894 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 AKT2P31751 481 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 CCR2P41597 374 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 KRTAP10-8P60410 259 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 GABPB1Q06547 395 aaPredicted RBP2.94□□□□□ -1.94
ITGB1-214ENST00000488427 PSG7Q13046 419 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 SRSF6Q13247 344 aaKnown RBP2.94□□□□□ -1.94
ITGB1-214ENST00000488427 PSMD5Q16401 504 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 STAC2Q6ZMT1 411 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 HSD11B1LQ7Z5J1 315 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 ALLCQ8N6M5 410 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 NFAM1Q8NET5 270 aaPredicted RBP2.94□□□□□ -1.94
ITGB1-214ENST00000488427 MGARPQ8TDB4 240 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 DNAJA4Q8WW22 397 aaPredicted RBP2.94□□□□□ -1.94
ITGB1-214ENST00000488427 TRUB1Q8WWH5 349 aaKnown RBP2.94□□□□□ -1.94
ITGB1-214ENST00000488427 HTR3CQ8WXA8 447 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 TMEM158Q8WZ71 300 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 ZNF184Q99676 751 aaPredicted RBP2.94□□□□□ -1.94
ITGB1-214ENST00000488427 APMAPQ9HDC9 416 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 PXMP2Q9NR77 195 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 RDH8Q9NYR8 311 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 CD274Q9NZQ7 290 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 OR1A1Q9P1Q5 309 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 SPRR3Q9UBC9 169 aa2.94□□□□□ -1.94
ITGB1-214ENST00000488427 FAM230AA0A1W2PPH8 454 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 FAM231BA6NCW3 169 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 SAGE2PA6NJ88 616 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 PRRG1O14668 218 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 JAK2O60674 1132 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 KLF8O95600 359 aaPredicted RBP2.93□□□□□ -1.94
ITGB1-214ENST00000488427 HSPD1P10809 573 aaKnown RBP2.93□□□□□ -1.94
ITGB1-214ENST00000488427 CLUP10909 449 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 HSPA5P11021 654 aaKnown RBP2.93□□□□□ -1.94
ITGB1-214ENST00000488427 PDHBP11177 359 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 ANXA3P12429 323 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 COX6B1P14854 86 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 VDAC1P21796 283 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 PRDX6P30041 224 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 CCND2P30279 289 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 GCKP35557 465 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 SLC10A7Q0GE19 358 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 ZNF154Q13106 437 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 EXOSC2Q13868 293 aaKnown RBP2.93□□□□□ -1.94
ITGB1-214ENST00000488427 TFDP1Q14186 410 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 CCDC14Q49A88 953 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 TWF2Q6IBS0 349 aaKnown RBP2.93□□□□□ -1.94
ITGB1-214ENST00000488427 ZNF589Q86UQ0 364 aaPredicted RBP2.93□□□□□ -1.94
ITGB1-214ENST00000488427 EFCAB13Q8IY85 973 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 CEND1Q8N111 149 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 OR2AP1Q8NGE2 309 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 TAF4BQ92750 862 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 ADIPOR1Q96A54 375 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 TBCDQ9BTW9 1192 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 PPDPFQ9H3Y8 114 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 PLSCR3Q9NRY6 295 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 FETUBQ9UGM5 382 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 HOOK1Q9UJC3 728 aaKnown RBP2.93□□□□□ -1.94
ITGB1-214ENST00000488427 AP4B1Q9Y6B7 739 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 SLCO1B1Q9Y6L6 691 aa2.93□□□□□ -1.94
ITGB1-214ENST00000488427 INTS1Q8N201 2190 aaKnown RBP2.93□□□□□ -1.94
ITGB1-214ENST00000488427 ANAPC1Q9H1A4 1944 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 KMT2CQ8NEZ4 4911 aaKnown RBP2.92□□□□□ -1.94
ITGB1-214ENST00000488427 ANKRD30BLA7E2S9 258 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 TCP11X1B4DZS4 312 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 SGK1O00141 431 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 ADAM12O43184 909 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 DFNA5O60443 496 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 TOM1L1O75674 476 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 GPX5O75715 221 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 TNFSF15O95150 251 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 HBQ1P09105 142 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 LIPCP11150 499 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms