RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 FOXK2Q01167 660 aa13.03□□□□□ -0.32
RER1-207ENST00000488353 ILF3Q12906 894 aaKnown RBP eCLIP13.03□□□□□ -0.329e-8■■■■■ 39
RER1-207ENST00000488353 SERTAD2Q14140 314 aa13.03□□□□□ -0.32
RER1-207ENST00000488353 ZIC1Q15915 447 aa13.03□□□□□ -0.32
RER1-207ENST00000488353 NDUFAF6Q330K2 333 aa13.03□□□□□ -0.32
RER1-207ENST00000488353 TMEM35AQ53FP2 167 aa13.03□□□□□ -0.32
RER1-207ENST00000488353 ZNF546Q86UE3 836 aa13.03□□□□□ -0.32
RER1-207ENST00000488353 MUC20Q8N307 709 aaPredicted RBP13.03□□□□□ -0.32
RER1-207ENST00000488353 OR14C36Q8NHC7 312 aa13.03□□□□□ -0.32
RER1-207ENST00000488353 SYNPRQ8TBG9 265 aa13.03□□□□□ -0.32
RER1-207ENST00000488353 GLYATL2Q8WU03 294 aa13.03□□□□□ -0.32
RER1-207ENST00000488353 MRI1Q9BV20 369 aa13.03□□□□□ -0.32
RER1-207ENST00000488353 PITHD1Q9GZP4 211 aaPredicted RBP13.03□□□□□ -0.32
RER1-207ENST00000488353 ENKD1Q9H0I2 346 aa13.03□□□□□ -0.32
RER1-207ENST00000488353 TMEM138Q9NPI0 162 aa13.03□□□□□ -0.32
RER1-207ENST00000488353 APOBEC3BQ9UH17 382 aaKnown RBP13.03□□□□□ -0.32
RER1-207ENST00000488353 GPN3Q9UHW5 284 aaPredicted RBP13.03□□□□□ -0.32
RER1-207ENST00000488353 SLC7A7Q9UM01 511 aa13.03□□□□□ -0.32
RER1-207ENST00000488353 EDARQ9UNE0 448 aa13.03□□□□□ -0.32
RER1-207ENST00000488353 BRWD1Q9NSI6 2320 aa13.02□□□□□ -0.32
RER1-207ENST00000488353 RAB19A4D1S5 217 aa13.02□□□□□ -0.32
RER1-207ENST00000488353 YKT6O15498 198 aa13.02□□□□□ -0.32
RER1-207ENST00000488353 NARSO43776 548 aaKnown RBP13.02□□□□□ -0.32
RER1-207ENST00000488353 F3P13726 295 aa13.02□□□□□ -0.32
RER1-207ENST00000488353 C5AR1P21730 350 aa13.02□□□□□ -0.32
RER1-207ENST00000488353 NOS3P29474 1203 aa13.02□□□□□ -0.32
RER1-207ENST00000488353 MPIP34949 423 aa13.02□□□□□ -0.32
RER1-207ENST00000488353 SIRPAP78324 504 aa13.02□□□□□ -0.32
RER1-207ENST00000488353 STX4Q12846 297 aa13.02□□□□□ -0.32
RER1-207ENST00000488353 TP53I3Q53FA7 332 aa13.02□□□□□ -0.32
RER1-207ENST00000488353 DHRS7BQ6IAN0 325 aaPredicted RBP13.02□□□□□ -0.32
RER1-207ENST00000488353 SLC48A1Q6P1K1 146 aa13.02□□□□□ -0.32
RER1-207ENST00000488353 SSX6Q7RTT6 188 aa13.02□□□□□ -0.32
RER1-207ENST00000488353 ARMC10Q8N2F6 343 aa13.02□□□□□ -0.32
RER1-207ENST00000488353 OR52E1Q8NGJ3 308 aa13.02□□□□□ -0.32
RER1-207ENST00000488353 SLC35A4Q96G79 324 aa13.02□□□□□ -0.32
RER1-207ENST00000488353 TEX101Q9BY14 249 aa13.02□□□□□ -0.32
RER1-207ENST00000488353 CES1P1Q9UKY3 287 aa13.02□□□□□ -0.32
RER1-207ENST00000488353 RCBTB2O95199 551 aa13.02□□□□□ -0.33
RER1-207ENST00000488353 SNAPINO95295 136 aa13.02□□□□□ -0.33
RER1-207ENST00000488353 GLAP06280 429 aa13.02□□□□□ -0.33
RER1-207ENST00000488353 IL9P15248 144 aa13.02□□□□□ -0.33
RER1-207ENST00000488353 KIR2DL1P43626 348 aaPredicted RBP13.02□□□□□ -0.33
RER1-207ENST00000488353 SNRPNP63162 240 aaKnown RBP13.02□□□□□ -0.33
RER1-207ENST00000488353 BTN3A2P78410 334 aa13.02□□□□□ -0.33
RER1-207ENST00000488353 POU4F2Q12837 409 aa13.02□□□□□ -0.33
RER1-207ENST00000488353 ENPP2Q13822 863 aa13.02□□□□□ -0.33
RER1-207ENST00000488353 MRM1Q6IN84 353 aaKnown RBP13.02□□□□□ -0.33
RER1-207ENST00000488353 RPL13AP3Q6NVV1 102 aa13.02□□□□□ -0.33
RER1-207ENST00000488353 SLC16A11Q8NCK7 471 aa13.02□□□□□ -0.33
RER1-207ENST00000488353 MOAP1Q96BY2 351 aa13.02□□□□□ -0.33
RER1-207ENST00000488353 HAVCR1Q96D42 359 aa13.02□□□□□ -0.33
RER1-207ENST00000488353 PELI1Q96FA3 418 aa13.02□□□□□ -0.33
RER1-207ENST00000488353 CDCA3Q99618 268 aaPredicted RBP13.02□□□□□ -0.33
RER1-207ENST00000488353 LMAN2LQ9H0V9 348 aa13.02□□□□□ -0.33
RER1-207ENST00000488353 ANKRD10Q9NXR5 420 aa13.02□□□□□ -0.33
RER1-207ENST00000488353 SLC35A3Q9Y2D2 325 aa13.02□□□□□ -0.33
RER1-207ENST00000488353 TRBV2A0A0J9YWF9 115 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 KANTRA0A1W2PQU2 76 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 SYNDIG1LA6NDD5 238 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 RIIAD1A6NNX1 92 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 ADH1BP00325 375 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 CD1AP06126 327 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 PTHLHP12272 177 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 SLC2A5P22732 501 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 CDK2P24941 298 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 MNDAP41218 407 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 UBE2MP61081 183 aaKnown RBP13.01□□□□□ -0.33
RER1-207ENST00000488353 ACTA2P62736 377 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 ACTG2P63267 376 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 PWWP2BQ6NUJ5 590 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 RPL22L1Q6P5R6 122 aaKnown RBP13.01□□□□□ -0.33
RER1-207ENST00000488353 UNQ9370/PRO34162Q6UXP9 181 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 ZNF600Q6ZNG1 722 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 OR4N5Q8IXE1 308 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 ZNF433Q8N7K0 673 aaPredicted RBP13.01□□□□□ -0.33
RER1-207ENST00000488353 OR2L5Q8NG80 312 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 ADAMTS15Q8TE58 950 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 CDS1Q92903 461 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 ELSPBP1Q96BH3 223 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 MRPL38Q96DV4 380 aaKnown RBP13.01□□□□□ -0.33
RER1-207ENST00000488353 ARSGQ96EG1 525 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 PHYHIPLQ96FC7 376 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 A0A1W2PQU0 124 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 TRAPPC13A5PLN9 417 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 FABP1P07148 127 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 SPP1P10451 314 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 CLUP10909 449 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 UBE2IP63279 158 aaKnown RBP13.01□□□□□ -0.33
RER1-207ENST00000488353 DCDP81605 110 aaKnown RBP13.01□□□□□ -0.33
RER1-207ENST00000488353 SGCGQ13326 291 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 MANEAQ5SRI9 462 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 FAM111BQ6SJ93 734 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 KRT77Q7Z794 578 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 CBLN2Q8IUK8 224 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 SYS1Q8N2H4 156 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 OR14A16Q8NHC5 309 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 GFI1Q99684 422 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 NOX4Q9NPH5 578 aa13.01□□□□□ -0.33
RER1-207ENST00000488353 MBD2Q9UBB5 411 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms