RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-215	ENST00000487401	DSCAM	O60469	2012 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401		B9A039	149 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	RPL36A-HNRNPH2	H7BZ11	118 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	ZNF432	O94892	652 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	NQO1	P15559	274 aa	Known RBP	10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	GPX2	P18283	190 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	CAPZA2	P47755	286 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	NAAA	Q02083	359 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	OR1Q1	Q15612	314 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	SWI5	Q1ZZU3	235 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	MST1L	Q2TV78	715 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	TMEM249	Q2WGJ8	235 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	VHLL	Q6RSH7	139 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	ZNF771	Q7L3S4	317 aa	Predicted RBP	10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	SLC46A3	Q7Z3Q1	461 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	RANBP3L	Q86VV4	465 aa	Predicted RBP	10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	HIPK1	Q86Z02	1210 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	UEVLD	Q8IX04	471 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	CCDC36	Q8IYA8	594 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	C10orf111	Q8N326	155 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	FAM169B	Q8N8A8	192 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	OR4F15	Q8NGB8	312 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	OR6S1	Q8NH40	331 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	C10orf105	Q8TEF2	133 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	PROX1	Q92786	737 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	VRK1	Q99986	396 aa	Predicted RBP	10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	CRLF2	Q9HC73	371 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	GPR35	Q9HC97	309 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	SLC52A3	Q9NQ40	469 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	CA10	Q9NS85	328 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	INTS9	Q9NV88	658 aa	Known RBP	10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	B3GAT1	Q9P2W7	334 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	CRNN	Q9UBG3	495 aa	Predicted RBP	10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	LEF1	Q9UJU2	399 aa	Predicted RBP	10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	GMEB1	Q9Y692	573 aa		10.84	□□□□□ -0.67
SREBF1-215	ENST00000487401	NUP214	P35658	2090 aa	Predicted RBP	10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	IGKV1D-42	A0A075B6H8	117 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401		A0A087WUJ7	227 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	TRBV5-3	A0A0A0MS03	114 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	LOC102725191	A0A1B0GVB3	256 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401		M0R3G1	203 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	LY6H	O94772	140 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	OR4A8	P0C604	315 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	CECR9	P0C854	216 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	CBR1	P16152	277 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	USF1	P22415	310 aa	Predicted RBP	10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	PDLIM4	P50479	330 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	PMS2P3	Q13401	168 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	ADRM1	Q16186	407 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	CARTPT	Q16568	116 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	CYP51A1	Q16850	503 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	CEACAM16	Q2WEN9	425 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	CHRFAM7A	Q494W8	412 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	RUNDC3A	Q59EK9	446 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	TTMP	Q5BVD1	217 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	CARD17	Q5XLA6	110 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	CYB5R2	Q6BCY4	276 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	DLEU7	Q6UYE1	221 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	COMTD1	Q86VU5	262 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	SMYD1	Q8NB12	490 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	C11orf65	Q8NCR3	313 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	ADPRHL1	Q8NDY3	354 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	NANOS1	Q8WY41	292 aa	Known RBP	10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	OR2M2	Q96R28	347 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	KCNK17	Q96T54	332 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	CPPED1	Q9BRF8	314 aa	Predicted RBP	10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	RSPO3	Q9BXY4	272 aa	Predicted RBP	10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	IKZF5	Q9H5V7	419 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	B3GAT2	Q9NPZ5	323 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	TRIM33	Q9UPN9	1127 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401	NDUFAF1	Q9Y375	327 aa		10.83	□□□□□ -0.68
SREBF1-215	ENST00000487401		A0A096LNT2	108 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401		A0A0B4J2E0	115 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401		A0A1B0GX12	115 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	ZNF726	A6NNF4	738 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	HMGB1P1	B2RPK0	211 aa	Predicted RBP	10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	MS4A18	H0YCH9	400 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	ANGPT2	O15123	496 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	TRAF3IP2	O43734	574 aa	Predicted RBP	10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	FZD7	O75084	574 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	MFN2	O95140	757 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	IGLV1-44	P01699	117 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	ARR3	P36575	388 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	IDH3G	P51553	393 aa	Predicted RBP	10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	CDH12	P55289	794 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	VLDLR	P98155	873 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	RBBP4	Q09028	425 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	NPRL3	Q12980	569 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	MS4A18	Q3C1V0	323 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	C6orf52	Q5T4I8	152 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	PODNL1	Q6PEZ8	512 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	DHDDS	Q86SQ9	333 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	SNX32	Q86XE0	403 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	C20orf196	Q8IYI0	205 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	SCAI	Q8N9R8	606 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	IL17RD	Q8NFM7	739 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	CKAP2	Q8WWK9	683 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	THOC1	Q96FV9	657 aa	Known RBP	10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	MCHR1	Q99705	422 aa		10.82	□□□□□ -0.68
SREBF1-215	ENST00000487401	PIMREG	Q9BSJ6	248 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms