RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 MS4A18H0YCH9 400 aa21.34■■□□□ 1.01
LIME1-206ENST00000487026 RPL36A-HNRNPH2H7BZ11 118 aa21.34■■□□□ 1.01
LIME1-206ENST00000487026 FZD7O75084 574 aa21.34■■□□□ 1.01
LIME1-206ENST00000487026 HPRP00739 348 aa21.34■■□□□ 1.01
LIME1-206ENST00000487026 HLA-DOBP13765 273 aa21.34■■□□□ 1.01
LIME1-206ENST00000487026 SERPINF1P36955 418 aa21.34■■□□□ 1.01
LIME1-206ENST00000487026 RGS8P57771 180 aaPredicted RBP21.34■■□□□ 1.01
LIME1-206ENST00000487026 CEACAM16Q2WEN9 425 aa21.34■■□□□ 1.01
LIME1-206ENST00000487026 MS4A18Q3C1V0 323 aa21.34■■□□□ 1.01
LIME1-206ENST00000487026 C6orf52Q5T4I8 152 aa21.34■■□□□ 1.01
LIME1-206ENST00000487026 CARD17Q5XLA6 110 aa21.34■■□□□ 1.01
LIME1-206ENST00000487026 DLEU7Q6UYE1 221 aa21.34■■□□□ 1.01
LIME1-206ENST00000487026 NET1Q7Z628 596 aaPredicted RBP21.34■■□□□ 1.01
LIME1-206ENST00000487026 MYPOPQ86VE0 399 aaPredicted RBP21.34■■□□□ 1.01
LIME1-206ENST00000487026 SLC47A1Q96FL8 570 aa21.34■■□□□ 1.01
LIME1-206ENST00000487026 SORCS2Q96PQ0 1159 aa21.34■■□□□ 1.01
LIME1-206ENST00000487026 OR2M2Q96R28 347 aa21.34■■□□□ 1.01
LIME1-206ENST00000487026 ZNF607Q96SK3 696 aa21.34■■□□□ 1.01
LIME1-206ENST00000487026 KATNB1Q9BVA0 655 aa21.34■■□□□ 1.01
LIME1-206ENST00000487026 TMEM27Q9HBJ8 222 aa21.34■■□□□ 1.01
LIME1-206ENST00000487026 CRLF2Q9HC73 371 aa21.34■■□□□ 1.01
LIME1-206ENST00000487026 CA10Q9NS85 328 aa21.34■■□□□ 1.01
LIME1-206ENST00000487026 ZNF503-AS2A6NEH8 195 aa21.33■■□□□ 1.01
LIME1-206ENST00000487026 TRAF3IP2O43734 574 aaPredicted RBP21.33■■□□□ 1.01
LIME1-206ENST00000487026 SEC14L2O76054 403 aa21.33■■□□□ 1.01
LIME1-206ENST00000487026 ATP4BP51164 291 aa21.33■■□□□ 1.01
LIME1-206ENST00000487026 SH3BGRP55822 239 aaPredicted RBP21.33■■□□□ 1.01
LIME1-206ENST00000487026 NCALDP61601 193 aa21.33■■□□□ 1.01
LIME1-206ENST00000487026 SQLEQ14534 574 aa21.33■■□□□ 1.01
LIME1-206ENST00000487026 RUNDC3AQ59EK9 446 aa21.33■■□□□ 1.01
LIME1-206ENST00000487026 PHYHD1Q5SRE7 291 aa21.33■■□□□ 1.01
LIME1-206ENST00000487026 FAM91A1Q658Y4 838 aa21.33■■□□□ 1.01
LIME1-206ENST00000487026 C5orf46Q6UWT4 87 aa21.33■■□□□ 1.01
LIME1-206ENST00000487026 CXXC5Q7LFL8 322 aaKnown RBP21.33■■□□□ 1.01
LIME1-206ENST00000487026 ARMC8Q8IUR7 673 aa21.33■■□□□ 1.01
LIME1-206ENST00000487026 ANKS4BQ8N8V4 417 aa21.33■■□□□ 1.01
LIME1-206ENST00000487026 SMYD1Q8NB12 490 aa21.33■■□□□ 1.01
LIME1-206ENST00000487026 VRK1Q99986 396 aaPredicted RBP21.33■■□□□ 1.01
LIME1-206ENST00000487026 CPPED1Q9BRF8 314 aaPredicted RBP21.33■■□□□ 1.01
LIME1-206ENST00000487026 EMC6Q9BV81 110 aa21.33■■□□□ 1.01
LIME1-206ENST00000487026 SELENONQ9NZV5 590 aa21.33■■□□□ 1.01
LIME1-206ENST00000487026 TESQ9UGI8 421 aaKnown RBP21.33■■□□□ 1.01
LIME1-206ENST00000487026 SLC13A4Q9UKG4 626 aa21.33■■□□□ 1.01
LIME1-206ENST00000487026 CORO2BQ9UQ03 480 aa21.33■■□□□ 1.01
LIME1-206ENST00000487026 YLPM1P49750 1951 aaKnown RBP21.32■■□□□ 1
LIME1-206ENST00000487026 A0A087WUJ7 227 aa21.32■■□□□ 1
LIME1-206ENST00000487026 A0A0B4J2E0 115 aa21.32■■□□□ 1
LIME1-206ENST00000487026 A0A1B0GX12 115 aa21.32■■□□□ 1
LIME1-206ENST00000487026 PRORSD1PA6NEY8 169 aa21.32■■□□□ 1
LIME1-206ENST00000487026 M0R3G1 203 aa21.32■■□□□ 1
LIME1-206ENST00000487026 IGLV1-44P01699 117 aa21.32■■□□□ 1
LIME1-206ENST00000487026 BGLAPP02818 100 aa21.32■■□□□ 1
LIME1-206ENST00000487026 OR4A8P0C604 315 aa21.32■■□□□ 1
LIME1-206ENST00000487026 HOXB1P14653 301 aaPredicted RBP21.32■■□□□ 1
LIME1-206ENST00000487026 NQO1P15559 274 aaKnown RBP21.32■■□□□ 1
LIME1-206ENST00000487026 SNRPD2P62316 118 aaKnown RBP21.32■■□□□ 1
LIME1-206ENST00000487026 VLDLRP98155 873 aa21.32■■□□□ 1
LIME1-206ENST00000487026 HGFACQ04756 655 aa21.32■■□□□ 1
LIME1-206ENST00000487026 ADIPOQQ15848 244 aa21.32■■□□□ 1
LIME1-206ENST00000487026 TMEM123Q8N131 208 aa21.32■■□□□ 1
LIME1-206ENST00000487026 HIPK4Q8NE63 616 aa21.32■■□□□ 1
LIME1-206ENST00000487026 PIK3C3Q8NEB9 887 aa21.32■■□□□ 1
LIME1-206ENST00000487026 ZNF317Q96PQ6 595 aaPredicted RBP21.32■■□□□ 1
LIME1-206ENST00000487026 LOC102725191A0A1B0GVB3 256 aa21.31■■□□□ 1
LIME1-206ENST00000487026 LRRN3E7EW58 273 aa21.31■■□□□ 1
LIME1-206ENST00000487026 SERPINB7O75635 380 aa21.31■■□□□ 1
LIME1-206ENST00000487026 MFN2O95140 757 aa21.31■■□□□ 1
LIME1-206ENST00000487026 IGKV3-15P01624 115 aa21.31■■□□□ 1
LIME1-206ENST00000487026 CBR1P16152 277 aa21.31■■□□□ 1
LIME1-206ENST00000487026 PAX7P23759 505 aa21.31■■□□□ 1
LIME1-206ENST00000487026 CAPZA2P47755 286 aa21.31■■□□□ 1
LIME1-206ENST00000487026 IDH3GP51553 393 aaPredicted RBP21.31■■□□□ 1
LIME1-206ENST00000487026 CDH12P55289 794 aa21.31■■□□□ 1
LIME1-206ENST00000487026 SELPLGQ14242 412 aa21.31■■□□□ 1
LIME1-206ENST00000487026 CARTPTQ16568 116 aa21.31■■□□□ 1
LIME1-206ENST00000487026 SLC46A3Q7Z3Q1 461 aa21.31■■□□□ 1
LIME1-206ENST00000487026 PTOV1Q86YD1 416 aa21.31■■□□□ 1
LIME1-206ENST00000487026 WDFY1Q8IWB7 410 aa21.31■■□□□ 1
LIME1-206ENST00000487026 UEVLDQ8IX04 471 aa21.31■■□□□ 1
LIME1-206ENST00000487026 ANKK1Q8NFD2 765 aa21.31■■□□□ 1
LIME1-206ENST00000487026 PROX1Q92786 737 aa21.31■■□□□ 1
LIME1-206ENST00000487026 TXNDC15Q96J42 360 aa21.31■■□□□ 1
LIME1-206ENST00000487026 MOGAT1Q96PD6 335 aa21.31■■□□□ 1
LIME1-206ENST00000487026 MXRA5Q9NR99 2828 aa21.31■■□□□ 1
LIME1-206ENST00000487026 B9A039 149 aa21.3■■□□□ 1
LIME1-206ENST00000487026 CSF3P09919 207 aa21.3■■□□□ 1
LIME1-206ENST00000487026 USF1P22415 310 aaPredicted RBP21.3■■□□□ 1
LIME1-206ENST00000487026 NPRL3Q12980 569 aa21.3■■□□□ 1
LIME1-206ENST00000487026 C3orf36Q3SXR2 165 aa21.3■■□□□ 1
LIME1-206ENST00000487026 CHRFAM7AQ494W8 412 aa21.3■■□□□ 1
LIME1-206ENST00000487026 MDP1Q86V88 176 aa21.3■■□□□ 1
LIME1-206ENST00000487026 C10orf53Q8N6V4 93 aa21.3■■□□□ 1
LIME1-206ENST00000487026 FAM169BQ8N8A8 192 aa21.3■■□□□ 1
LIME1-206ENST00000487026 ADPRHL1Q8NDY3 354 aa21.3■■□□□ 1
LIME1-206ENST00000487026 SLC41A3Q96GZ6 507 aa21.3■■□□□ 1
LIME1-206ENST00000487026 KCNK17Q96T54 332 aa21.3■■□□□ 1
LIME1-206ENST00000487026 INTS9Q9NV88 658 aaKnown RBP21.3■■□□□ 1
LIME1-206ENST00000487026 MED29Q9NX70 200 aa21.3■■□□□ 1
LIME1-206ENST00000487026 ANGPT4Q9Y264 503 aa21.3■■□□□ 1
LIME1-206ENST00000487026 M0R3H8 397 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms