RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 KLK8O60259 260 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 ATP1B1P05026 303 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 CD79BP40259 229 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 TEX19Q8NA77 164 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 METTL9Q9H1A3 318 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 TRAV36DV7A0A075B6V5 113 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 WDPCPO95876 746 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 NR0B2Q15466 257 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 RBM45Q8IUH3 476 aaKnown RBP15.21■□□□□ 0.03
COL7A1-210ENST00000487017 FRMD1Q8N878 549 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 ARPC5LQ9BPX5 153 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 LIN7BQ9HAP6 207 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 PPP1R14DQ9NXH3 145 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 LRIT1Q9P2V4 623 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 MYO5AQ9Y4I1 1855 aaKnown RBP15.21■□□□□ 0.03
COL7A1-210ENST00000487017 TRABD2BA6NFA1 517 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 TEAD1P28347 426 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 SLC35D3Q5M8T2 416 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 MMP21Q8N119 569 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 SLC7A6Q92536 515 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 CMSS1Q9BQ75 279 aaKnown RBP15.21■□□□□ 0.03
COL7A1-210ENST00000487017 ACAD8Q9UKU7 415 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 DDX60LQ5H9U9 1706 aaKnown RBP15.21■□□□□ 0.03
COL7A1-210ENST00000487017 SLC5A10A0PJK1 596 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 SLC34A2O95436 690 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 IGLV3-25P01717 112 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 RIMKLAQ8IXN7 391 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 ANKLE1Q8NAG6 615 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 OR13C9Q8NGT0 318 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 HHIPL1Q96JK4 782 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 PDFQ9HBH1 243 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 ZNF286AQ9HBT8 521 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 TNFRSF12AQ9NP84 129 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 DNAJB11Q9UBS4 358 aa15.21■□□□□ 0.03
COL7A1-210ENST00000487017 SLC35E2P0CK97 266 aa15.21■□□□□ 0.02
COL7A1-210ENST00000487017 BTG1P62324 171 aa15.21■□□□□ 0.02
COL7A1-210ENST00000487017 MOB3CQ70IA8 216 aa15.21■□□□□ 0.02
COL7A1-210ENST00000487017 TMEM59Q9BXS4 323 aa15.21■□□□□ 0.02
COL7A1-210ENST00000487017 ULBP2Q9BZM5 246 aa15.21■□□□□ 0.02
COL7A1-210ENST00000487017 GNG13Q9P2W3 67 aa15.21■□□□□ 0.02
COL7A1-210ENST00000487017 CD207Q9UJ71 328 aa15.21■□□□□ 0.02
COL7A1-210ENST00000487017 TMEM202A6NGA9 273 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 GFYI3L273 518 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 I6L893 689 aaPredicted RBP15.2■□□□□ 0.02
COL7A1-210ENST00000487017 GPR137BO60478 399 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 POU3F2P20265 443 aaPredicted RBP15.2■□□□□ 0.02
COL7A1-210ENST00000487017 PCBD1P61457 104 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 RPP30P78346 268 aaKnown RBP15.2■□□□□ 0.02
COL7A1-210ENST00000487017 TEKQ02763 1124 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 IL1F10Q8WWZ1 152 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 C22orf15Q8WYQ4 148 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 ZNF566Q969W8 418 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 RAB3CQ96E17 227 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 MAP3K3Q99759 626 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 RNF167Q9H6Y7 350 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 SH3BGRL2Q9UJC5 107 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 MCTS1Q9ULC4 181 aaKnown RBP15.2■□□□□ 0.02
COL7A1-210ENST00000487017 K7EPK0 472 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 SULT1B1O43704 296 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 FBXO24O75426 580 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 LGI1O95970 557 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 GCH1P30793 250 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 ETV1P50549 477 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 AFF3P51826 1226 aaKnown RBP15.2■□□□□ 0.02
COL7A1-210ENST00000487017 GPR176Q14439 515 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 CD276Q5ZPR3 534 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 STEAP1BQ6NZ63 245 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 FAM71E2Q8N5Q1 922 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 TCEAL7Q9BRU2 100 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 CDCA4Q9BXL8 241 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 CNTNAP3Q9BZ76 1288 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 NMNAT2Q9BZQ4 307 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 ASB1Q9Y576 335 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 NPFFR2Q9Y5X5 522 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 SRMP19623 302 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 CD38P28907 300 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 PLA2G7Q13093 441 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 SLC16A11Q8NCK7 471 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 BBS1Q8NFJ9 593 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 OR10K1Q8NGX5 313 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 PCNPQ8WW12 178 aaKnown RBP15.2■□□□□ 0.02
COL7A1-210ENST00000487017 UTS2O95399 124 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 ARRB2P32121 409 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 SLC6A12P48065 614 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 MRPS21P82921 87 aaKnown RBP15.2■□□□□ 0.02
COL7A1-210ENST00000487017 ESCO2Q56NI9 601 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 ESPNLQ6ZVH7 1005 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 MKXQ8IYA7 352 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 KIF25Q9UIL4 384 aa15.2■□□□□ 0.02
COL7A1-210ENST00000487017 A0A0B4J2A0 478 aa15.19■□□□□ 0.02
COL7A1-210ENST00000487017 CCR9P51686 369 aa15.19■□□□□ 0.02
COL7A1-210ENST00000487017 HTD2P86397 168 aa15.19■□□□□ 0.02
COL7A1-210ENST00000487017 ASAH1Q13510 395 aa15.19■□□□□ 0.02
COL7A1-210ENST00000487017 MISPQ8IVT2 679 aa15.19■□□□□ 0.02
COL7A1-210ENST00000487017 ZNF610Q8N9Z0 462 aa15.19■□□□□ 0.02
COL7A1-210ENST00000487017 SEC22AQ96IW7 307 aa15.19■□□□□ 0.02
COL7A1-210ENST00000487017 SHPKQ9UHJ6 478 aa15.19■□□□□ 0.02
COL7A1-210ENST00000487017 A0A1B0GTW7 788 aa15.19■□□□□ 0.02
COL7A1-210ENST00000487017 CHRM4P08173 479 aa15.19■□□□□ 0.02
COL7A1-210ENST00000487017 SBK3P0C264 359 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms