RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 CADP27708 2225 aa16.1■□□□□ 0.17
PRPF40A-209ENST00000486100 SLC43A1O75387 559 aa16.09■□□□□ 0.17
PRPF40A-209ENST00000486100 HOXB1P14653 301 aaPredicted RBP16.09■□□□□ 0.17
PRPF40A-209ENST00000486100 PTNP21246 168 aa16.09■□□□□ 0.17
PRPF40A-209ENST00000486100 FABP6P51161 128 aa16.09■□□□□ 0.17
PRPF40A-209ENST00000486100 ROR2Q01974 943 aaKnown RBP16.09■□□□□ 0.17
PRPF40A-209ENST00000486100 SF3A3Q12874 501 aaKnown RBP eCLIP16.09■□□□□ 0.17
PRPF40A-209ENST00000486100 TNK1Q13470 666 aa16.09■□□□□ 0.17
PRPF40A-209ENST00000486100 NPTX1Q15818 432 aa16.09■□□□□ 0.17
PRPF40A-209ENST00000486100 KRTAP21-3Q3LHN1 58 aa16.09■□□□□ 0.17
PRPF40A-209ENST00000486100 MMEL1Q495T6 779 aa16.09■□□□□ 0.17
PRPF40A-209ENST00000486100 ANKRD16Q6P6B7 361 aa16.09■□□□□ 0.17
PRPF40A-209ENST00000486100 CCDC80Q76M96 950 aa16.09■□□□□ 0.17
PRPF40A-209ENST00000486100 FBXL14Q8N1E6 418 aa16.09■□□□□ 0.17
PRPF40A-209ENST00000486100 SCAIQ8N9R8 606 aa16.09■□□□□ 0.17
PRPF40A-209ENST00000486100 OR8J3Q8NGG0 315 aa16.09■□□□□ 0.17
PRPF40A-209ENST00000486100 RASSF5Q8WWW0 418 aa16.09■□□□□ 0.17
PRPF40A-209ENST00000486100 TAMM41Q96BW9 452 aa16.09■□□□□ 0.17
PRPF40A-209ENST00000486100 ASPNQ9BXN1 380 aa16.09■□□□□ 0.17
PRPF40A-209ENST00000486100 CBLN4Q9NTU7 201 aa16.09■□□□□ 0.17
PRPF40A-209ENST00000486100 BBIP1A8MTZ0 92 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 TRAF3IP2O43734 574 aaPredicted RBP16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 CHP2O43745 196 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 AKAP8O43823 692 aaKnown RBP16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 IGHV4-39P01824 125 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 NQO1P15559 274 aaKnown RBP16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 CD247P20963 164 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 SH3BGRP55822 239 aaPredicted RBP16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 UBE2NP61088 152 aaKnown RBP16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 IL1RL1Q01638 556 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 GUCY1A3Q02108 690 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 PMS2P3Q13401 168 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 MAPRE2Q15555 327 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 RABL3Q5HYI8 236 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 ENTPD8Q5MY95 495 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 ZNF544Q6NX49 715 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 B3GLCTQ6Y288 498 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 CALHM3Q86XJ0 350 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 RBM45Q8IUH3 476 aaKnown RBP16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 UEVLDQ8IX04 471 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 MUC15Q8N387 334 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 PIK3C3Q8NEB9 887 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 OR4D11Q8NGI4 311 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 MOGAT1Q96PD6 335 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 OR2M2Q96R28 347 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 ECSITQ9BQ95 431 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 CCDC134Q9H6E4 229 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 MRPL39Q9NYK5 338 aaKnown RBP16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 ATP23Q9Y6H3 246 aa16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 NIPBLQ6KC79 2804 aaeCLIP16.08■□□□□ 0.16
PRPF40A-209ENST00000486100 ARPC4-TTLL3A0A0A6YYG9 625 aa16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 LOC100653049A0A140TA62 436 aa16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 CPSF4LA6NMK7 179 aaKnown RBP16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 FXYD1O00168 92 aa16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 MRASO14807 208 aa16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 NDUFS7O75251 213 aa16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 KRT34O76011 436 aa16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 HPRP00739 348 aa16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 HLA-DOBP13765 273 aa16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 ARF1P84077 181 aaKnown RBP16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 HSP90B2PQ58FF3 399 aa16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 REP15Q6BDI9 236 aa16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 C11orf71Q6IPW1 123 aa16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 NHLRC1Q6VVB1 395 aa16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 GPR137CQ8N3F9 429 aa16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 C10orf53Q8N6V4 93 aa16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 ADAMTS16Q8TE57 1224 aa16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 ADAD1Q96M93 576 aaKnown RBP16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 HS6ST2Q96MM7 605 aa16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 BARX1Q9HBU1 254 aaPredicted RBP16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 GPR35Q9HC97 309 aa16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 GDF2Q9UK05 429 aaPredicted RBP16.07■□□□□ 0.16
PRPF40A-209ENST00000486100 A0A096LPE4 126 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 IGHV1-18A0A0C4DH31 117 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 A0A1W2PPZ6 126 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 LRRN3E7EW58 273 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 PLPP3O14495 311 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 LYPD3O95274 346 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 MT-ATP6P00846 226 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 THY1P04216 161 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 APOBEC3AP31941 199 aaPredicted RBP16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 ACVR1BP36896 505 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 CRYBA2P53672 197 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 PUDPQ08623 228 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 VEZF1Q14119 521 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 TMEM123Q8N131 208 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 PCYOX1LQ8NBM8 494 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 VANGL1Q8TAA9 524 aaPredicted RBP16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 LRR1Q96L50 414 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 ZNF583Q96ND8 569 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 SLC38A2Q96QD8 506 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 CACNG6Q9BXT2 260 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 PCDHAC1Q9H158 963 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 NELFAQ9H3P2 528 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 CRLF2Q9HC73 371 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 MOV10Q9HCE1 1003 aaKnown RBP16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 GID8Q9NWU2 228 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 CRNNQ9UBG3 495 aaPredicted RBP16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 MOKQ9UQ07 419 aa16.06■□□□□ 0.16
PRPF40A-209ENST00000486100 NOX1Q9Y5S8 564 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms