RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 A0A1W2PRQ8 180 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 BLOC1S5-TXNDC5H3BN57 136 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 EBAG9O00559 213 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 RNF13O43567 381 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 AKAP8O43823 692 aaKnown RBP10.47□□□□□ -0.73
HPS4-214ENST00000485842 LYZL6O75951 148 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 KRT33AO76009 404 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 GADD45GO95257 159 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 ASAH2BP0C7U1 165 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 MAKP20794 623 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 IL32P24001 234 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 RRM2P31350 389 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 GPR4P46093 362 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 SMIM11AP58511 58 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 FAPQ12884 760 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 DGCR6Q14129 220 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 FAM98BQ52LJ0 330 aaKnown RBP10.47□□□□□ -0.73
HPS4-214ENST00000485842 TSPO2Q5TGU0 170 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 C9orf135Q5VTT2 229 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 CARD17Q5XLA6 110 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 FBXW9Q5XUX1 488 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 PODNL1Q6PEZ8 512 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 Q6ZT83 130 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 MBOAT2Q6ZWT7 520 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 GABRG1Q8N1C3 465 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 SLC7A13Q8TCU3 470 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 ZC3HAV1LQ96H79 300 aaKnown RBP10.47□□□□□ -0.73
HPS4-214ENST00000485842 ZNF347Q96SE7 839 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 MED18Q9BUE0 208 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 SLCO5A1Q9H2Y9 848 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 MAGIXQ9H6Y5 334 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 SLC24A3Q9HC58 644 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 SLC7A10Q9NS82 523 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 MED29Q9NX70 200 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 AURKCQ9UQB9 309 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 NOX1Q9Y5S8 564 aa10.47□□□□□ -0.73
HPS4-214ENST00000485842 ANKHD1Q8IWZ3 2542 aaKnown RBP10.46□□□□□ -0.73
HPS4-214ENST00000485842 DHRS12A0PJE2 317 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 SH3D21A4FU49 640 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 AQP12BA6NM10 295 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 EFCAB9A8MZ26 197 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 SLC43A1O75387 559 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 IGF2P01344 180 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 IGHV1-2P23083 117 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 DNAJA1P31689 397 aaKnown RBP10.46□□□□□ -0.73
HPS4-214ENST00000485842 AQP2P41181 271 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 MAGEA2P43356 314 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 FOXG1P55316 489 aaPredicted RBP10.46□□□□□ -0.73
HPS4-214ENST00000485842 PRKCDQ05655 676 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 RPL18Q07020 188 aaKnown RBP10.46□□□□□ -0.73
HPS4-214ENST00000485842 LGALS3BPQ08380 585 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 ITGADQ13349 1161 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 MELKQ14680 651 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 P2RY6Q15077 328 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 SEC23BQ15437 767 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 ALKBH2Q6NS38 261 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 BHLHA15Q7RTS1 189 aaPredicted RBP10.46□□□□□ -0.73
HPS4-214ENST00000485842 PIWIL3Q7Z3Z3 882 aaKnown RBP10.46□□□□□ -0.73
HPS4-214ENST00000485842 PXKQ7Z7A4 578 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 AQP12AQ8IXF9 295 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 ADGRG5Q8IZF4 528 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 CDK20Q8IZL9 346 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 RNF113BQ8IZP6 322 aaKnown RBP10.46□□□□□ -0.73
HPS4-214ENST00000485842 ANKK1Q8NFD2 765 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 OR4K5Q8NGD3 323 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 OR13C2Q8NGS9 318 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 MOSPD2Q8NHP6 518 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 FAM222BQ8WU58 562 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 KISS1RQ969F8 398 aaPredicted RBP10.46□□□□□ -0.73
HPS4-214ENST00000485842 POP5Q969H6 163 aaKnown RBP10.46□□□□□ -0.73
HPS4-214ENST00000485842 FAM46AQ96IP4 442 aaKnown RBP10.46□□□□□ -0.73
HPS4-214ENST00000485842 TXNDC15Q96J42 360 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 DHRS1Q96LJ7 313 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 ALKBH3Q96Q83 286 aaPredicted RBP10.46□□□□□ -0.73
HPS4-214ENST00000485842 EMC6Q9BV81 110 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 ACTR6Q9GZN1 396 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 ASB6Q9NWX5 421 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 TAS2R5Q9NYW4 299 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.46□□□□□ -0.73
HPS4-214ENST00000485842 MALT1Q9UDY8 824 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 NDRG3Q9UGV2 375 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 RCE1Q9Y256 329 aa10.46□□□□□ -0.73
HPS4-214ENST00000485842 TRAV27A0A087WT01 109 aa10.45□□□□□ -0.74
HPS4-214ENST00000485842 LOC102725191A0A1B0GVB3 256 aa10.45□□□□□ -0.74
HPS4-214ENST00000485842 SLC35F4A4IF30 521 aa10.45□□□□□ -0.74
HPS4-214ENST00000485842 MCIDASD6RGH6 385 aa10.45□□□□□ -0.74
HPS4-214ENST00000485842 RAD51DO75771 328 aa10.45□□□□□ -0.74
HPS4-214ENST00000485842 CNOT4O95628 575 aaKnown RBP10.45□□□□□ -0.74
HPS4-214ENST00000485842 F13BP05160 661 aa10.45□□□□□ -0.74
HPS4-214ENST00000485842 RAP2AP10114 183 aa10.45□□□□□ -0.74
HPS4-214ENST00000485842 IFNGR1P15260 489 aa10.45□□□□□ -0.74
HPS4-214ENST00000485842 PSMB1P20618 241 aaKnown RBP10.45□□□□□ -0.74
HPS4-214ENST00000485842 COX5AP20674 150 aa10.45□□□□□ -0.74
HPS4-214ENST00000485842 PCYT1AP49585 367 aa10.45□□□□□ -0.74
HPS4-214ENST00000485842 BIDP55957 195 aa10.45□□□□□ -0.74
HPS4-214ENST00000485842 ZP4Q12836 540 aa10.45□□□□□ -0.74
HPS4-214ENST00000485842 SFRP5Q5T4F7 317 aa10.45□□□□□ -0.74
HPS4-214ENST00000485842 SLC35D2Q76EJ3 337 aa10.45□□□□□ -0.74
HPS4-214ENST00000485842 ZNF295-AS1Q8N0V1 137 aa10.45□□□□□ -0.74
HPS4-214ENST00000485842 POMGNT2Q8NAT1 580 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms