RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 IGKV1D-42A0A075B6H8 117 aa16.67■□□□□ 0.26
COL27A1-205ENST00000485397 A0A1B0GWA3 101 aa16.67■□□□□ 0.26
COL27A1-205ENST00000485397 C5orf58C9J3I9 102 aa16.67■□□□□ 0.26
COL27A1-205ENST00000485397 AIM2O14862 343 aa16.67■□□□□ 0.26
COL27A1-205ENST00000485397 FZD7O75084 574 aa16.67■□□□□ 0.26
COL27A1-205ENST00000485397 HOXB9P17482 250 aaPredicted RBP16.67■□□□□ 0.26
COL27A1-205ENST00000485397 GRPRP30550 384 aa16.67■□□□□ 0.26
COL27A1-205ENST00000485397 PPOXP50336 477 aa16.67■□□□□ 0.26
COL27A1-205ENST00000485397 C1DQ13901 141 aaKnown RBP16.67■□□□□ 0.26
COL27A1-205ENST00000485397 CEACAM16Q2WEN9 425 aa16.67■□□□□ 0.26
COL27A1-205ENST00000485397 C6orf89Q6UWU4 347 aa16.67■□□□□ 0.26
COL27A1-205ENST00000485397 ZCCHC24Q8N2G6 241 aaKnown RBP16.67■□□□□ 0.26
COL27A1-205ENST00000485397 GPR137CQ8N3F9 429 aa16.67■□□□□ 0.26
COL27A1-205ENST00000485397 NUP37Q8NFH4 326 aa16.67■□□□□ 0.26
COL27A1-205ENST00000485397 SOX7Q9BT81 388 aa16.67■□□□□ 0.26
COL27A1-205ENST00000485397 RAB1BQ9H0U4 201 aa16.67■□□□□ 0.26
COL27A1-205ENST00000485397 C12orf10Q9HB07 376 aa16.67■□□□□ 0.26
COL27A1-205ENST00000485397 CRLF2Q9HC73 371 aa16.67■□□□□ 0.26
COL27A1-205ENST00000485397 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.67■□□□□ 0.262e-18■■■□□ 15.6
COL27A1-205ENST00000485397 IGHV2OR16-5A0A0B4J2B6 119 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 LRP5LA4QPB2 252 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 hCG_2039718K7EN88 272 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 SEC14L2O76054 403 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 STAMBPO95630 424 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 TGFAP01135 160 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 ZNF23P17027 643 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 NPR2P20594 1047 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 SLC18A1P54219 525 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 MAGOHP61326 146 aaKnown RBP16.66■□□□□ 0.26
COL27A1-205ENST00000485397 IL1RL1Q01638 556 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 NPRL3Q12980 569 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 FADDQ13158 208 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 PHYHD1Q5SRE7 291 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 FAM69AQ5T7M9 428 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 SPATA21Q7Z572 469 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 MDP1Q86V88 176 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 MSRB3Q8IXL7 192 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 C10orf111Q8N326 155 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 SVOPLQ8N434 492 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 ANKK1Q8NFD2 765 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 NFKBIDQ8NI38 313 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 SLC38A4Q969I6 547 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 OR2M2Q96R28 347 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 DOK1Q99704 481 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 RAD21L1Q9H4I0 556 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 ZNF442Q9H7R0 627 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 MOV10Q9HCE1 1003 aaKnown RBP16.66■□□□□ 0.26
COL27A1-205ENST00000485397 NKIRAS1Q9NYS0 192 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 SLC25A37Q9NYZ2 338 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 SLAMF8Q9P0V8 285 aa16.66■□□□□ 0.26
COL27A1-205ENST00000485397 TMEM129A0AVI4 362 aa16.65■□□□□ 0.26
COL27A1-205ENST00000485397 TRAF3IP2O43734 574 aaPredicted RBP16.65■□□□□ 0.26
COL27A1-205ENST00000485397 OR2T1O43869 369 aa16.65■□□□□ 0.26
COL27A1-205ENST00000485397 TPST1O60507 370 aa16.65■□□□□ 0.26
COL27A1-205ENST00000485397 ETS2P15036 469 aa16.65■□□□□ 0.26
COL27A1-205ENST00000485397 PRKAR1BP31321 381 aa16.65■□□□□ 0.26
COL27A1-205ENST00000485397 THBS2P35442 1172 aa16.65■□□□□ 0.26
COL27A1-205ENST00000485397 CAPZA2P47755 286 aa16.65■□□□□ 0.26
COL27A1-205ENST00000485397 GLIPR1L2Q4G1C9 344 aa16.65■□□□□ 0.26
COL27A1-205ENST00000485397 CARD17Q5XLA6 110 aa16.65■□□□□ 0.26
COL27A1-205ENST00000485397 H1FNTQ75WM6 255 aaPredicted RBP16.65■□□□□ 0.26
COL27A1-205ENST00000485397 TMEM123Q8N131 208 aa16.65■□□□□ 0.26
COL27A1-205ENST00000485397 LSMEM1Q8N8F7 131 aa16.65■□□□□ 0.26
COL27A1-205ENST00000485397 PIK3C3Q8NEB9 887 aa16.65■□□□□ 0.26
COL27A1-205ENST00000485397 USH1CQ9Y6N9 552 aa16.65■□□□□ 0.26
COL27A1-205ENST00000485397 TRAV36DV7A0A075B6V5 113 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 SH3PXD2BA1X283 911 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 MS4A18H0YCH9 400 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 M0R3G1 203 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 HPRP00739 348 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 IGFBP1P08833 259 aaPredicted RBP16.64■□□□□ 0.25
COL27A1-205ENST00000485397 ARAFP10398 606 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 HLA-DOBP13765 273 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 DAOP14920 347 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 ARR3P36575 388 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 MS4A18Q3C1V0 323 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 ALG10BQ5I7T1 473 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 GCNT6Q5T4J0 391 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 DHRS4L2Q6PKH6 230 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 EPGNQ6UW88 154 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 NET1Q7Z628 596 aaPredicted RBP16.64■□□□□ 0.25
COL27A1-205ENST00000485397 FUNDC1Q8IVP5 155 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 GOLGA6L1Q8N7Z2 621 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 ZNF540Q8NDQ6 660 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 EMC6Q9BV81 110 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 C19orf24Q9BVV8 132 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 KLHL14Q9P2G3 628 aa16.64■□□□□ 0.25
COL27A1-205ENST00000485397 LOC102725191A0A1B0GVB3 256 aa16.63■□□□□ 0.25
COL27A1-205ENST00000485397 VSTM5A8MXK1 200 aa16.63■□□□□ 0.25
COL27A1-205ENST00000485397 ZNF99A8MXY4 864 aaPredicted RBP16.63■□□□□ 0.25
COL27A1-205ENST00000485397 IL2RGP31785 369 aa16.63■□□□□ 0.25
COL27A1-205ENST00000485397 CDK6Q00534 326 aa16.63■□□□□ 0.25
COL27A1-205ENST00000485397 LRIF1Q5T3J3 769 aa16.63■□□□□ 0.25
COL27A1-205ENST00000485397 KRT80Q6KB66 452 aa16.63■□□□□ 0.25
COL27A1-205ENST00000485397 C5orf46Q6UWT4 87 aa16.63■□□□□ 0.25
COL27A1-205ENST00000485397 UEVLDQ8IX04 471 aa16.63■□□□□ 0.25
COL27A1-205ENST00000485397 C20orf196Q8IYI0 205 aa16.63■□□□□ 0.25
COL27A1-205ENST00000485397 CDK20Q8IZL9 346 aa16.63■□□□□ 0.25
COL27A1-205ENST00000485397 RNF217Q8TC41 542 aa16.63■□□□□ 0.25
COL27A1-205ENST00000485397 DNAJA4Q8WW22 397 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms