RNA–Protein interactions for RNA: ENST00000482630.6

VEGFA-213, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-213ENST00000482630 USF3Q68DE3 2245 aa22.04■■□□□ 1.12
VEGFA-213ENST00000482630 FBP2O00757 339 aa22.03■■□□□ 1.12
VEGFA-213ENST00000482630 IGHV4-39P01824 125 aa22.03■■□□□ 1.12
VEGFA-213ENST00000482630 BGLAPP02818 100 aa22.03■■□□□ 1.12
VEGFA-213ENST00000482630 MMEL1Q495T6 779 aa22.03■■□□□ 1.12
VEGFA-213ENST00000482630 ANKRD16Q6P6B7 361 aa22.03■■□□□ 1.12
VEGFA-213ENST00000482630 PIK3C3Q8NEB9 887 aa22.03■■□□□ 1.12
VEGFA-213ENST00000482630 GPR32P1Q8NGA4 272 aa22.03■■□□□ 1.12
VEGFA-213ENST00000482630 RASSF5Q8WWW0 418 aa22.03■■□□□ 1.12
VEGFA-213ENST00000482630 BCL2L2Q92843 193 aaPredicted RBP22.03■■□□□ 1.12
VEGFA-213ENST00000482630 SLC41A3Q96GZ6 507 aa22.03■■□□□ 1.12
VEGFA-213ENST00000482630 CACNG6Q9BXT2 260 aa22.03■■□□□ 1.12
VEGFA-213ENST00000482630 MOV10Q9HCE1 1003 aaKnown RBP22.03■■□□□ 1.12
VEGFA-213ENST00000482630 CADP27708 2225 aa22.02■■□□□ 1.12
VEGFA-213ENST00000482630 ARPC4-TTLL3A0A0A6YYG9 625 aa22.02■■□□□ 1.12
VEGFA-213ENST00000482630 RPL36A-HNRNPH2H7BZ11 118 aa22.02■■□□□ 1.12
VEGFA-213ENST00000482630 CHP2O43745 196 aa22.02■■□□□ 1.12
VEGFA-213ENST00000482630 VIMP08670 466 aaKnown RBP22.02■■□□□ 1.12
VEGFA-213ENST00000482630 HOXB1P14653 301 aaPredicted RBP22.02■■□□□ 1.12
VEGFA-213ENST00000482630 PTNP21246 168 aa22.02■■□□□ 1.12
VEGFA-213ENST00000482630 ACVR1BP36896 505 aa22.02■■□□□ 1.12
VEGFA-213ENST00000482630 MAPRE2Q15555 327 aa22.02■■□□□ 1.12
VEGFA-213ENST00000482630 VMACQ2NL98 169 aa22.02■■□□□ 1.12
VEGFA-213ENST00000482630 COQ5Q5HYK3 327 aa22.02■■□□□ 1.12
VEGFA-213ENST00000482630 C11orf71Q6IPW1 123 aa22.02■■□□□ 1.12
VEGFA-213ENST00000482630 NANOGP8Q6NSW7 305 aa22.02■■□□□ 1.12
VEGFA-213ENST00000482630 C10orf53Q8N6V4 93 aa22.02■■□□□ 1.12
VEGFA-213ENST00000482630 OR6T1Q8NGN1 323 aa22.02■■□□□ 1.12
VEGFA-213ENST00000482630 KCNS3Q9BQ31 491 aa22.02■■□□□ 1.12
VEGFA-213ENST00000482630 NANOGQ9H9S0 305 aa22.02■■□□□ 1.12
VEGFA-213ENST00000482630 MRPL39Q9NYK5 338 aaKnown RBP22.02■■□□□ 1.12
VEGFA-213ENST00000482630 GDF2Q9UK05 429 aaPredicted RBP22.02■■□□□ 1.12
VEGFA-213ENST00000482630 BBIP1A8MTZ0 92 aa22.01■■□□□ 1.11
VEGFA-213ENST00000482630 MS4A18H0YCH9 400 aa22.01■■□□□ 1.11
VEGFA-213ENST00000482630 TRAF3IP2O43734 574 aaPredicted RBP22.01■■□□□ 1.11
VEGFA-213ENST00000482630 NPPAP01160 153 aa22.01■■□□□ 1.11
VEGFA-213ENST00000482630 KLF10Q13118 480 aa22.01■■□□□ 1.11
VEGFA-213ENST00000482630 PMS2P3Q13401 168 aa22.01■■□□□ 1.11
VEGFA-213ENST00000482630 MS4A18Q3C1V0 323 aa22.01■■□□□ 1.11
VEGFA-213ENST00000482630 ENTPD8Q5MY95 495 aa22.01■■□□□ 1.11
VEGFA-213ENST00000482630 OR8J3Q8NGG0 315 aa22.01■■□□□ 1.11
VEGFA-213ENST00000482630 LRRC58Q96CX6 371 aa22.01■■□□□ 1.11
VEGFA-213ENST00000482630 SLC38A2Q96QD8 506 aa22.01■■□□□ 1.11
VEGFA-213ENST00000482630 OR2M2Q96R28 347 aa22.01■■□□□ 1.11
VEGFA-213ENST00000482630 ECSITQ9BQ95 431 aa22.01■■□□□ 1.11
VEGFA-213ENST00000482630 GPR35Q9HC97 309 aa22.01■■□□□ 1.11
VEGFA-213ENST00000482630 MOKQ9UQ07 419 aa22.01■■□□□ 1.11
VEGFA-213ENST00000482630 A0A096LPE4 126 aa22■■□□□ 1.11
VEGFA-213ENST00000482630 A0A1W2PPZ6 126 aa22■■□□□ 1.11
VEGFA-213ENST00000482630 CPSF4LA6NMK7 179 aaKnown RBP22■■□□□ 1.11
VEGFA-213ENST00000482630 ATP6V1G2-DDX39BF2Z307 99 aa22■■□□□ 1.11
VEGFA-213ENST00000482630 NDUFS7O75251 213 aa22■■□□□ 1.11
VEGFA-213ENST00000482630 MT-ATP6P00846 226 aa22■■□□□ 1.11
VEGFA-213ENST00000482630 BMP4P12644 408 aa22■■□□□ 1.11
VEGFA-213ENST00000482630 CD247P20963 164 aa22■■□□□ 1.11
VEGFA-213ENST00000482630 APOBEC3AP31941 199 aaPredicted RBP22■■□□□ 1.11
VEGFA-213ENST00000482630 GZMMP51124 257 aa22■■□□□ 1.11
VEGFA-213ENST00000482630 PUDPQ08623 228 aa22■■□□□ 1.11
VEGFA-213ENST00000482630 NPTX1Q15818 432 aa22■■□□□ 1.11
VEGFA-213ENST00000482630 VANGL1Q8TAA9 524 aaPredicted RBP22■■□□□ 1.11
VEGFA-213ENST00000482630 TAMM41Q96BW9 452 aa22■■□□□ 1.11
VEGFA-213ENST00000482630 MOGAT1Q96PD6 335 aa22■■□□□ 1.11
VEGFA-213ENST00000482630 NOX1Q9Y5S8 564 aa22■■□□□ 1.11
VEGFA-213ENST00000482630 IGHV1-18A0A0C4DH31 117 aa21.99■■□□□ 1.11
VEGFA-213ENST00000482630 RNF223E7ERA6 249 aa21.99■■□□□ 1.11
VEGFA-213ENST00000482630 MRASO14807 208 aa21.99■■□□□ 1.11
VEGFA-213ENST00000482630 ARF1P84077 181 aaKnown RBP21.99■■□□□ 1.11
VEGFA-213ENST00000482630 POU3F1Q03052 451 aaPredicted RBP21.99■■□□□ 1.11
VEGFA-213ENST00000482630 CHRNB3Q05901 458 aa21.99■■□□□ 1.11
VEGFA-213ENST00000482630 SF3A3Q12874 501 aaKnown RBP eCLIP21.99■■□□□ 1.119e-12■■■■■ 32
VEGFA-213ENST00000482630 C3orf36Q3SXR2 165 aa21.99■■□□□ 1.11
VEGFA-213ENST00000482630 HSP90B2PQ58FF3 399 aa21.99■■□□□ 1.11
VEGFA-213ENST00000482630 REP15Q6BDI9 236 aa21.99■■□□□ 1.11
VEGFA-213ENST00000482630 CGB2Q6NT52 195 aa21.99■■□□□ 1.11
VEGFA-213ENST00000482630 LINC00114Q6XXX2 140 aa21.99■■□□□ 1.11
VEGFA-213ENST00000482630 CCDC80Q76M96 950 aa21.99■■□□□ 1.11
VEGFA-213ENST00000482630 TMEM123Q8N131 208 aa21.99■■□□□ 1.11
VEGFA-213ENST00000482630 ADAMTS16Q8TE57 1224 aa21.99■■□□□ 1.11
VEGFA-213ENST00000482630 KATNB1Q9BVA0 655 aa21.99■■□□□ 1.11
VEGFA-213ENST00000482630 NELFAQ9H3P2 528 aa21.99■■□□□ 1.11
VEGFA-213ENST00000482630 CRLF2Q9HC73 371 aa21.99■■□□□ 1.11
VEGFA-213ENST00000482630 SAR1AQ9NR31 198 aa21.99■■□□□ 1.11
VEGFA-213ENST00000482630 ZNF446Q9NWS9 450 aa21.99■■□□□ 1.11
VEGFA-213ENST00000482630 TRAPPC13A5PLN9 417 aa21.98■■□□□ 1.11
VEGFA-213ENST00000482630 HPRP00739 348 aa21.98■■□□□ 1.11
VEGFA-213ENST00000482630 NUDT6P53370 316 aa21.98■■□□□ 1.11
VEGFA-213ENST00000482630 RAB35Q15286 201 aa21.98■■□□□ 1.11
VEGFA-213ENST00000482630 CEACAM16Q2WEN9 425 aa21.98■■□□□ 1.11
VEGFA-213ENST00000482630 RABL3Q5HYI8 236 aa21.98■■□□□ 1.11
VEGFA-213ENST00000482630 TTC33Q6PID6 262 aaPredicted RBP21.98■■□□□ 1.11
VEGFA-213ENST00000482630 CALHM3Q86XJ0 350 aa21.98■■□□□ 1.11
VEGFA-213ENST00000482630 PCYOX1LQ8NBM8 494 aa21.98■■□□□ 1.11
VEGFA-213ENST00000482630 OR5J2Q8NH18 312 aa21.98■■□□□ 1.11
VEGFA-213ENST00000482630 REG4Q9BYZ8 158 aa21.98■■□□□ 1.11
VEGFA-213ENST00000482630 B3GAT2Q9NPZ5 323 aa21.98■■□□□ 1.11
VEGFA-213ENST00000482630 CRNNQ9UBG3 495 aaPredicted RBP21.98■■□□□ 1.11
VEGFA-213ENST00000482630 LRRN3E7EW58 273 aa21.97■■□□□ 1.11
VEGFA-213ENST00000482630 FXYD1O00168 92 aa21.97■■□□□ 1.11
VEGFA-213ENST00000482630 PLPP3O14495 311 aa21.97■■□□□ 1.11
VEGFA-213ENST00000482630 SSX4O60224 188 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms