RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 C12orf10Q9HB07 376 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 FGFR1OP2Q9NVK5 253 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 MED29Q9NX70 200 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 GMEB1Q9Y692 573 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 CSPG4Q6UVK1 2322 aa9.14□□□□□ -0.95
CPSF4-212ENST00000482251 IGHV4-30-2A0A087WSY4 118 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 A0A087WUJ7 227 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 ZNF503-AS2A6NEH8 195 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 C11orf98E9PRG8 122 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 M0QX08 132 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 M0R3G1 203 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 FBP2O00757 339 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 OR2T1O43869 369 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 ZNF432O94892 652 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 BGLAPP02818 100 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 CELA3BP08861 270 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 CECR9P0C854 216 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 PCGF2P35227 344 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 CAPZA2P47755 286 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 ARF1P84077 181 aaKnown RBP9.13□□□□□ -0.95
CPSF4-212ENST00000482251 NPRL3Q12980 569 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 NRF1Q16656 503 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 CEACAM16Q2WEN9 425 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 RABL3Q5HYI8 236 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 ENTPD8Q5MY95 495 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 PHYHD1Q5SRE7 291 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 FAM91A1Q658Y4 838 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 C5orf46Q6UWT4 87 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 WDR88Q6ZMY6 472 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 H1FNTQ75WM6 255 aaPredicted RBP9.13□□□□□ -0.95
CPSF4-212ENST00000482251 TSPYL5Q86VY4 417 aaPredicted RBP9.13□□□□□ -0.95
CPSF4-212ENST00000482251 WDFY1Q8IWB7 410 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 ZNF525Q8N782 197 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 OR4D11Q8NGI4 311 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 OR6T1Q8NGN1 323 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 STON2Q8WXE9 905 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 BCL2L2Q92843 193 aaPredicted RBP9.13□□□□□ -0.95
CPSF4-212ENST00000482251 TAMM41Q96BW9 452 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 FBXO17Q96EF6 278 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 ADAD1Q96M93 576 aaKnown RBP9.13□□□□□ -0.95
CPSF4-212ENST00000482251 OR2M2Q96R28 347 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 EPYCQ99645 322 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 ARHGDIGQ99819 225 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 ASPNQ9BXN1 380 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 LINC00470Q9BZP3 86 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 KAT8Q9H7Z6 458 aaKnown RBP9.13□□□□□ -0.95
CPSF4-212ENST00000482251 BARX1Q9HBU1 254 aaPredicted RBP9.13□□□□□ -0.95
CPSF4-212ENST00000482251 CRLF2Q9HC73 371 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 USP22Q9UPT9 525 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 RCE1Q9Y256 329 aa9.13□□□□□ -0.95
CPSF4-212ENST00000482251 MS4A18H0YCH9 400 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 AKAP8O43823 692 aaKnown RBP9.12□□□□□ -0.95
CPSF4-212ENST00000482251 FZD7O75084 574 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 TROVE2P10155 538 aaKnown RBP eCLIP9.12□□□□□ -0.95
CPSF4-212ENST00000482251 TNFRSF1BP20333 461 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 CD247P20963 164 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 AHCYP23526 432 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 CALCRP30988 508 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 IDH3GP51553 393 aaPredicted RBP9.12□□□□□ -0.95
CPSF4-212ENST00000482251 PUDPQ08623 228 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 RBBP4Q09028 425 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 PMS2P3Q13401 168 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 CAMK2DQ13557 499 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 TRMT5Q32P41 509 aaKnown RBP9.12□□□□□ -0.95
CPSF4-212ENST00000482251 MS4A18Q3C1V0 323 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 REP15Q6BDI9 236 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 CGB2Q6NT52 195 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 ZNF544Q6NX49 715 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 ANKRD16Q6P6B7 361 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 NET1Q7Z628 596 aaPredicted RBP9.12□□□□□ -0.95
CPSF4-212ENST00000482251 PRIMA1Q86XR5 153 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 TMEM123Q8N131 208 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 BHLHE22Q8NFJ8 381 aaPredicted RBP9.12□□□□□ -0.95
CPSF4-212ENST00000482251 SLC26A7Q8TE54 656 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 TXNDC15Q96J42 360 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 SIKE1Q9BRV8 207 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 HEATR1Q9H583 2144 aaKnown RBP9.12□□□□□ -0.95
CPSF4-212ENST00000482251 GPR35Q9HC97 309 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 PRDM4Q9UKN5 801 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 SLC7A7Q9UM01 511 aa9.12□□□□□ -0.95
CPSF4-212ENST00000482251 HIVEP2P31629 2446 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 ARPC4-TTLL3A0A0A6YYG9 625 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 OR6C65A6NJZ3 312 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 FXYD1O00168 92 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 MRASO14807 208 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 CHP2O43745 196 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 GPRIN2O60269 458 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 SHOX2O60902 331 aaPredicted RBP9.11□□□□□ -0.95
CPSF4-212ENST00000482251 CH25HO95992 272 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 CRYAAP02489 173 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 THY1P04216 161 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 TP53P04637 393 aaPredicted RBP9.11□□□□□ -0.95
CPSF4-212ENST00000482251 VIMP08670 466 aaKnown RBP9.11□□□□□ -0.95
CPSF4-212ENST00000482251 ADORA3P0DMS8 318 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 B4GALT1P15291 398 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 ARFIP2P53365 341 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 CRYBA2P53672 197 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 SH3BGRP55822 239 aaPredicted RBP9.11□□□□□ -0.95
CPSF4-212ENST00000482251 NAAAQ02083 359 aa9.11□□□□□ -0.95
CPSF4-212ENST00000482251 MELKQ14680 651 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms