RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 FANCFQ9NPI8 374 aa15.73■□□□□ 0.11
UPF3A-206ENST00000480362 TIGARQ9NQ88 270 aa15.73■□□□□ 0.11
UPF3A-206ENST00000480362 CMC2Q9NRP2 79 aa15.73■□□□□ 0.11
UPF3A-206ENST00000480362 ZNF346Q9UL40 294 aaKnown RBP15.73■□□□□ 0.11
UPF3A-206ENST00000480362 GPR52Q9Y2T5 361 aa15.73■□□□□ 0.11
UPF3A-206ENST00000480362 IGHV3-15A0A0B4J1V0 119 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 A0A1W2PNV4 684 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 A0A1W2PRG6 482 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 RAMP1O60894 148 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 WBP4O75554 376 aaKnown RBP15.72■□□□□ 0.11
UPF3A-206ENST00000480362 RPSAP08865 295 aaKnown RBP15.72■□□□□ 0.11
UPF3A-206ENST00000480362 CPN1P15169 458 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 HIST1H1CP16403 213 aaKnown RBP15.72■□□□□ 0.11
UPF3A-206ENST00000480362 ENPP1P22413 925 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 RPS3AP61247 264 aaKnown RBP15.72■□□□□ 0.11
UPF3A-206ENST00000480362 TOP3AQ13472 1001 aaPredicted RBP15.72■□□□□ 0.11
UPF3A-206ENST00000480362 C6orf141Q5SZD1 244 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 ZNF362Q5T0B9 420 aaPredicted RBP15.72■□□□□ 0.11
UPF3A-206ENST00000480362 GPR139Q6DWJ6 353 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 LAIR2Q6ISS4 152 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 PXKQ7Z7A4 578 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 FAM26EQ8N5C1 309 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 Q8NA96 180 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 ANKK1Q8NFD2 765 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 OR52E2Q8NGJ4 325 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 OR4K13Q8NH42 304 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 TMEM163Q8TC26 289 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 WDYHV1Q96HA8 205 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 ZNF845Q96IR2 970 aaPredicted RBP15.72■□□□□ 0.11
UPF3A-206ENST00000480362 OXGR1Q96P68 337 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 TSPAN32Q96QS1 320 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 UCN2Q96RP3 112 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 TXNIPQ9H3M7 391 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 CLN6Q9NWW5 311 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 GRHPRQ9UBQ7 328 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 KLHL21Q9UJP4 597 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 RASD1Q9Y272 281 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 IGF2RP11717 2491 aa15.72■□□□□ 0.11
UPF3A-206ENST00000480362 TEX13CA0A0J9YWL9 993 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 RIIAD1A6NNX1 92 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 AQP7O14520 342 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 SMAD9O15198 467 aaKnown RBP15.71■□□□□ 0.11
UPF3A-206ENST00000480362 TXNDC12O95881 172 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 IFNGP01579 166 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 IGHMP01871 453 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 SDHAP31040 664 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 FMO3P31513 532 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 CHN2P52757 468 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 RPL27P61353 136 aaKnown RBP15.71■□□□□ 0.11
UPF3A-206ENST00000480362 HSF1Q00613 529 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.71■□□□□ 0.11
UPF3A-206ENST00000480362 ACKR1Q16570 336 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 C3AR1Q16581 482 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 EMC4Q5J8M3 183 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 FAM180AQ6UWF9 173 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 BCDIN3DQ7Z5W3 292 aaKnown RBP15.71■□□□□ 0.11
UPF3A-206ENST00000480362 GPAT4Q86UL3 456 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 UEVLDQ8IX04 471 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 TEX19Q8NA77 164 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 LSM14AQ8ND56 463 aaKnown RBP15.71■□□□□ 0.11
UPF3A-206ENST00000480362 ROBO4Q8WZ75 1007 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 HDAC2Q92769 488 aaKnown RBP15.71■□□□□ 0.11
UPF3A-206ENST00000480362 CPNE4Q96A23 557 aaPredicted RBP15.71■□□□□ 0.11
UPF3A-206ENST00000480362 RASD2Q96D21 266 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 PLSCR2Q9NRY7 297 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 KLHL13Q9P2N7 655 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 B3GAT1Q9P2W7 334 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 NOX1Q9Y5S8 564 aa15.71■□□□□ 0.11
UPF3A-206ENST00000480362 A0A1B0GTH9 108 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 LOC102725191A0A1B0GVB3 256 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 VAMP5O95183 116 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 IFNGR1P15260 489 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 ACVR1BP36896 505 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 TEKQ02763 1124 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 POU3F1Q03052 451 aaPredicted RBP15.7■□□□□ 0.1
UPF3A-206ENST00000480362 ITGADQ13349 1161 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 C1DQ13901 141 aaKnown RBP15.7■□□□□ 0.1
UPF3A-206ENST00000480362 OCLNQ16625 522 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 SMN1Q16637 294 aaKnown RBP15.7■□□□□ 0.1
UPF3A-206ENST00000480362 SLC25A30Q5SVS4 291 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 NHLRC1Q6VVB1 395 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 SLC35D2Q76EJ3 337 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 CHMP1BQ7LBR1 199 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 CPOQ8IVL8 374 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 CISD2Q8N5K1 135 aaKnown RBP15.7■□□□□ 0.1
UPF3A-206ENST00000480362 SLC37A3Q8NCC5 494 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 BPIFB6Q8NFQ5 453 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 SARAFQ96BY9 339 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 TXNDC15Q96J42 360 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 LRR1Q96L50 414 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 Q96MT0 163 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 FN3KQ9H479 309 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 PAQR5Q9NXK6 330 aaPredicted RBP15.7■□□□□ 0.1
UPF3A-206ENST00000480362 DNAJC27Q9NZQ0 273 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 CAMK2AQ9UQM7 478 aa15.7■□□□□ 0.1
UPF3A-206ENST00000480362 DMXL2Q8TDJ6 3036 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 FAM183AA6NL82 134 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 NPIPA2E9PIF3 369 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 NPIPA3F8WFD2 350 aa15.69■□□□□ 0.1
UPF3A-206ENST00000480362 ZNHIT1O43257 154 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms