RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 CTBP2P56545 445 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 PMS2P3Q13401 168 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 LAPTM4AQ15012 233 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 SEC23BQ15437 767 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 ZNF74Q16587 644 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 EXOC3L2Q2M3D2 409 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 DEFB113Q30KQ7 82 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 GTF2IRD2BQ6EKJ0 949 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 TMEM225Q6GV28 225 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 OR2A2Q6IF42 318 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 VWA1Q6PCB0 445 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 PAQR6Q6TCH4 344 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 C5orf46Q6UWT4 87 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 RRM2BQ7LG56 351 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.04□□□□□ -1.12
VCP-206ENST00000480327 GTF2IRD2Q86UP8 949 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 SLC7A13Q8TCU3 470 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 ACOT11Q8WXI4 607 aaPredicted RBP8.04□□□□□ -1.12
VCP-206ENST00000480327 SGTBQ96EQ0 304 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 FAM46AQ96IP4 442 aaKnown RBP8.04□□□□□ -1.12
VCP-206ENST00000480327 RAB3IPQ96QF0 476 aaPredicted RBP8.04□□□□□ -1.12
VCP-206ENST00000480327 PSD2Q9BQI7 771 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 ZNF426Q9BUY5 554 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 ASPNQ9BXN1 380 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 KLHL4Q9C0H6 718 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 C12orf49Q9H741 205 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 ZNF629Q9UEG4 869 aaPredicted RBP8.04□□□□□ -1.12
VCP-206ENST00000480327 U3KQV3 271 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 CUBNO60494 3623 aa8.04□□□□□ -1.12
VCP-206ENST00000480327 A0A1W2PRQ8 180 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 EEF1E1-BLOC1S5C9J1V9 151 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 C11orf98E9PRG8 122 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 BLOC1S5-TXNDC5H3BN57 136 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 EEF1E1O43324 174 aaKnown RBP8.03□□□□□ -1.12
VCP-206ENST00000480327 DNPH1O43598 174 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 TNFSF13O75888 250 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 OR7A10O76100 309 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 HPRP00739 348 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 MT-ATP6P00846 226 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 HRGP04196 525 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 HIST1H2ABP04908 130 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 AHCYP23526 432 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 KIR2DL2P43627 348 aaPredicted RBP8.03□□□□□ -1.12
VCP-206ENST00000480327 GPR4P46093 362 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 P2RY4P51582 365 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 SMIM11AP58511 58 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 H3F3AP84243 136 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 DGCR6Q14129 220 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 RNPS1Q15287 305 aaKnown RBP8.03□□□□□ -1.12
VCP-206ENST00000480327 TMEM201Q5SNT2 666 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 ABLIM2Q6H8Q1 611 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 OR2T5Q6IEZ7 315 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 MBOAT2Q6ZWT7 520 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 H1FNTQ75WM6 255 aaPredicted RBP8.03□□□□□ -1.12
VCP-206ENST00000480327 HIST3H2AQ7L7L0 130 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 SLC46A3Q7Z3Q1 461 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 NUFIP2Q7Z417 695 aaKnown RBP8.03□□□□□ -1.12
VCP-206ENST00000480327 BTLAQ7Z6A9 289 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 LUZP2Q86TE4 346 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 BIVMQ86UB2 503 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 CXorf67Q86X51 503 aaPredicted RBP8.03□□□□□ -1.12
VCP-206ENST00000480327 SLC43A2Q8N370 569 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 OR4K5Q8NGD3 323 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 OR2T29Q8NH02 315 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 PIGXQ8TBF5 258 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 HIST1H2ACQ93077 130 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 POP5Q969H6 163 aaKnown RBP8.03□□□□□ -1.12
VCP-206ENST00000480327 BPIFA2Q96DR5 249 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 GMPPAQ96IJ6 420 aaPredicted RBP8.03□□□□□ -1.12
VCP-206ENST00000480327 DHRS1Q96LJ7 313 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 SLC19A3Q9BZV2 496 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 OPN3Q9H1Y3 402 aaPredicted RBP8.03□□□□□ -1.12
VCP-206ENST00000480327 ANKRD19PQ9H560 264 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 DENND2DQ9H6A0 471 aaPredicted RBP8.03□□□□□ -1.12
VCP-206ENST00000480327 REEP1Q9H902 201 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 NANSQ9NR45 359 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 KLHL9Q9P2J3 617 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 ING1Q9UK53 422 aaPredicted RBP8.03□□□□□ -1.12
VCP-206ENST00000480327 TMCC3Q9ULS5 477 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 EMC9Q9Y3B6 208 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 RTTNQ86VV8 2226 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 PRR14LQ5THK1 2151 aa8.03□□□□□ -1.12
VCP-206ENST00000480327 SH3PXD2BA1X283 911 aa8.02□□□□□ -1.13
VCP-206ENST00000480327 TUBAL3A6NHL2 446 aa8.02□□□□□ -1.13
VCP-206ENST00000480327 ZNF716A6NP11 495 aa8.02□□□□□ -1.13
VCP-206ENST00000480327 EFCAB9A8MZ26 197 aa8.02□□□□□ -1.13
VCP-206ENST00000480327 MS4A18H0YCH9 400 aa8.02□□□□□ -1.13
VCP-206ENST00000480327 PLPP3O14495 311 aa8.02□□□□□ -1.13
VCP-206ENST00000480327 SIAH2O43255 324 aa8.02□□□□□ -1.13
VCP-206ENST00000480327 OR10H3O60404 316 aa8.02□□□□□ -1.13
VCP-206ENST00000480327 SS18L1O75177 396 aaPredicted RBP8.02□□□□□ -1.13
VCP-206ENST00000480327 OR6A2O95222 327 aa8.02□□□□□ -1.13
VCP-206ENST00000480327 YES1P07947 543 aa8.02□□□□□ -1.13
VCP-206ENST00000480327 ADORA3P0DMS8 318 aa8.02□□□□□ -1.13
VCP-206ENST00000480327 SAGP10523 405 aaPredicted RBP8.02□□□□□ -1.13
VCP-206ENST00000480327 HLA-DOBP13765 273 aa8.02□□□□□ -1.13
VCP-206ENST00000480327 AGTR1P30556 359 aa8.02□□□□□ -1.13
VCP-206ENST00000480327 OPRM1P35372 400 aa8.02□□□□□ -1.13
VCP-206ENST00000480327 PEX19P40855 299 aa8.02□□□□□ -1.13
VCP-206ENST00000480327 ACTR3P61158 418 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms