RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 GEMIN6Q8WXD5 167 aaKnown RBP9.88□□□□□ -0.83
USP11-208ENST00000480104 MAGOHBQ96A72 148 aaKnown RBP9.88□□□□□ -0.83
USP11-208ENST00000480104 SSBP3Q9BWW4 388 aaPredicted RBP9.88□□□□□ -0.83
USP11-208ENST00000480104 OR51B6Q9H340 312 aa9.88□□□□□ -0.83
USP11-208ENST00000480104 GPR35Q9HC97 309 aa9.88□□□□□ -0.83
USP11-208ENST00000480104 ACOXLQ9NUZ1 547 aa9.88□□□□□ -0.83
USP11-208ENST00000480104 USH1CQ9Y6N9 552 aa9.88□□□□□ -0.83
USP11-208ENST00000480104 A0A0U1RQK1 487 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 ZC3H12DA2A288 527 aaKnown RBP9.87□□□□□ -0.83
USP11-208ENST00000480104 AQP7P3A6NL99 342 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 RPL36A-HNRNPH2H7BZ11 118 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 PPP6CO00743 305 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 SLC43A1O75387 559 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 MT-ND5P03915 603 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 UQCRC2P22695 453 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 FKBP2P26885 142 aaKnown RBP9.87□□□□□ -0.83
USP11-208ENST00000480104 TGFBR2P37173 567 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 ETV4P43268 484 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 PTDSS1P48651 473 aaKnown RBP9.87□□□□□ -0.83
USP11-208ENST00000480104 ZNF81P51508 661 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 EMX1Q04741 257 aaPredicted RBP9.87□□□□□ -0.83
USP11-208ENST00000480104 EGFEM1PQ0D2K5 195 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 CEACAM16Q2WEN9 425 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 SPIN4Q56A73 249 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 SPRNQ5BIV9 151 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 TTMPQ5BVD1 217 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 DCST2Q5T1A1 773 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 FAM71E1Q6IPT2 247 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 ZNF774Q6NX45 483 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 FRRS1Q6ZNA5 592 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 CREB3L2Q70SY1 520 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 RPS27LQ71UM5 84 aaKnown RBP9.87□□□□□ -0.83
USP11-208ENST00000480104 GRINAQ7Z429 371 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 LRRC28Q86X40 367 aaPredicted RBP9.87□□□□□ -0.83
USP11-208ENST00000480104 CENPLQ8N0S6 344 aaPredicted RBP9.87□□□□□ -0.83
USP11-208ENST00000480104 ANKK1Q8NFD2 765 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 Q8NFD4 153 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 GATAD2BQ8WXI9 593 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 PCGF1Q9BSM1 259 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 ACPTQ9BZG2 426 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 DPAGT1Q9H3H5 408 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 PIF1Q9H611 641 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 NANOGQ9H9S0 305 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 DUSP22Q9NRW4 184 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 VPREB3Q9UKI3 123 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 RCE1Q9Y256 329 aa9.87□□□□□ -0.83
USP11-208ENST00000480104 CENPVL1A0A0U1RR11 272 aa9.86□□□□□ -0.83
USP11-208ENST00000480104 KIR2DS1A0A191URI9 304 aa9.86□□□□□ -0.83
USP11-208ENST00000480104 CEACAM18A8MTB9 384 aa9.86□□□□□ -0.83
USP11-208ENST00000480104 ADARB2-AS1A8MUL3 147 aa9.86□□□□□ -0.83
USP11-208ENST00000480104 MANBAO00462 879 aa9.86□□□□□ -0.83
USP11-208ENST00000480104 DNALI1O14645 258 aaPredicted RBP9.86□□□□□ -0.83
USP11-208ENST00000480104 ZNF500O60304 480 aaPredicted RBP9.86□□□□□ -0.83
USP11-208ENST00000480104 URI1O94763 535 aaPredicted RBP9.86□□□□□ -0.83
USP11-208ENST00000480104 HSD3B1P14060 373 aa9.86□□□□□ -0.83
USP11-208ENST00000480104 LMO1P25800 156 aa9.86□□□□□ -0.83
USP11-208ENST00000480104 HSD3B2P26439 372 aa9.86□□□□□ -0.83
USP11-208ENST00000480104 LSP1P33241 339 aa9.86□□□□□ -0.83
USP11-208ENST00000480104 GSTM5P46439 218 aa9.86□□□□□ -0.83
USP11-208ENST00000480104 BTG1P62324 171 aa9.86□□□□□ -0.83
USP11-208ENST00000480104 FASTKD3Q14CZ7 662 aaKnown RBP9.86□□□□□ -0.83
USP11-208ENST00000480104 CAVIN1Q6NZI2 390 aaKnown RBP9.86□□□□□ -0.83
USP11-208ENST00000480104 EPHX4Q8IUS5 362 aa9.86□□□□□ -0.83
USP11-208ENST00000480104 DDIASQ8IXT1 998 aa9.86□□□□□ -0.83
USP11-208ENST00000480104 PDIK1LQ8N165 341 aa9.86□□□□□ -0.83
USP11-208ENST00000480104 CPEB3Q8NE35 698 aaKnown RBP9.86□□□□□ -0.83
USP11-208ENST00000480104 ZNF563Q8TA94 476 aa9.86□□□□□ -0.83
USP11-208ENST00000480104 CIDECQ96AQ7 238 aaPredicted RBP9.86□□□□□ -0.83
USP11-208ENST00000480104 PHF21BQ96EK2 531 aa9.86□□□□□ -0.83
USP11-208ENST00000480104 THOC1Q96FV9 657 aaKnown RBP9.86□□□□□ -0.83
USP11-208ENST00000480104 STACQ99469 402 aa9.86□□□□□ -0.83
USP11-208ENST00000480104 TANC2Q9HCD6 1990 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 CENPVL3A0A0U1RRI6 287 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 TMEM72A0PK05 275 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 ANKRD61A6NGH8 418 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 RNASEK-C17orf49H0YIS7 233 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 PDPK1O15530 556 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 BCAS1O75363 584 aaPredicted RBP9.85□□□□□ -0.83
USP11-208ENST00000480104 FBXO24O75426 580 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 CSTAP01040 98 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 SNRPBP14678 240 aaKnown RBP9.85□□□□□ -0.83
USP11-208ENST00000480104 RYKP34925 604 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 GIPRP48546 466 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 P2RY4P51582 365 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 CEACAM7Q14002 265 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 LASP1Q14847 261 aaKnown RBP9.85□□□□□ -0.83
USP11-208ENST00000480104 RAB39AQ14964 217 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 OR7A5Q15622 319 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 NOXRED1Q6NXP6 359 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 ZCCHC12Q6PEW1 402 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 C11orf88Q6PI97 169 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 CCDC137Q6PK04 289 aaKnown RBP9.85□□□□□ -0.83
USP11-208ENST00000480104 NDUFA11Q86Y39 141 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 PAQR4Q8N4S7 273 aaPredicted RBP9.85□□□□□ -0.83
USP11-208ENST00000480104 DDIT4LQ96D03 193 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 ASCL2Q99929 193 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 RHOXF2Q9BQY4 288 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 NUDT16L1Q9BRJ7 211 aaKnown RBP9.85□□□□□ -0.83
USP11-208ENST00000480104 DESI2Q9BSY9 194 aa9.85□□□□□ -0.83
USP11-208ENST00000480104 TRIM15Q9C019 465 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms