RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 PTOV1Q86YD1 416 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 ARMC8Q8IUR7 673 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 CLRN3Q8NCR9 226 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 MAGEE2Q8TD90 523 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-213ENST00000480102 CNOT9Q92600 299 aaKnown RBP4.34□□□□□ -1.71
PTCD3-213ENST00000480102 C3orf49Q96BT1 292 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 INTS12Q96CB8 462 aaKnown RBP4.34□□□□□ -1.71
PTCD3-213ENST00000480102 SLC47A1Q96FL8 570 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 AURKBQ96GD4 344 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-213ENST00000480102 SH3YL1Q96HL8 342 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-213ENST00000480102 RADILQ96JH8 1075 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 LRR1Q96L50 414 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 ZNF583Q96ND8 569 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 C8orf49Q96NF6 230 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 ARHGDIGQ99819 225 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 TMEM204Q9BSN7 226 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 RBM24Q9BX46 236 aaKnown RBP4.34□□□□□ -1.71
PTCD3-213ENST00000480102 TMEM120AQ9BXJ8 343 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 LINC00470Q9BZP3 86 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 ANKRD19PQ9H560 264 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 IKZF5Q9H5V7 419 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 NGBQ9NPG2 151 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 ALKBH4Q9NXW9 302 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 SH3BGRL2Q9UJC5 107 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 FBXO9Q9UK97 447 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-213ENST00000480102 PROCRQ9UNN8 238 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 SLC9A8Q9Y2E8 581 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 RPH3AQ9Y2J0 694 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-213ENST00000480102 MAGED1Q9Y5V3 778 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-213ENST00000480102 SCN3AQ9NY46 2000 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 OTOGQ6ZRI0 2925 aa4.34□□□□□ -1.72
PTCD3-213ENST00000480102 NBPF19A0A087WUL8 3843 aa4.34□□□□□ -1.72
PTCD3-213ENST00000480102 DOPEY2Q9Y3R5 2298 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 TMED7-TICAM2A0A0A6YYA0 188 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 A1L4Q6 167 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 ENO4A6NNW6 628 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 C17orf51A8MQB3 221 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 FAM220BPB1ANY3 271 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 H0YC42 278 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 SULT2B1O00204 365 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 NR5A2O00482 541 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 AP3D1O14617 1153 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 TNFSF11O14788 317 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 CHP2O43745 196 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 CXCL13O43927 109 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 SHOX2O60902 331 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-213ENST00000480102 DCTN3O75935 186 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 OR5F1O95221 314 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 NUDT14O95848 222 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 PLGP00747 810 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-213ENST00000480102 HRGP04196 525 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 CRYGSP22914 178 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 CD40P25942 277 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 IDUAP35475 653 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 IDH2P48735 452 aaKnown RBP4.33□□□□□ -1.72
PTCD3-213ENST00000480102 P2RY4P51582 365 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 TPD52P55327 224 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-213ENST00000480102 SH3BGRP55822 239 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-213ENST00000480102 CTBP2P56545 445 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 NME5P56597 212 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 TGFBR3Q03167 851 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 SRYQ05066 204 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 RASGEF1BQ0VAM2 473 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 FOXF2Q12947 444 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 GK3PQ14409 553 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 KRT72Q14CN4 511 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 CYP51A1Q16850 503 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 GTDC1Q4AE62 458 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 BEX5Q5H9J7 111 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 TIMM23BQ5SRD1 257 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 C1orf140Q5VVS0 124 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 FBXW9Q5XUX1 488 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 PRSS57Q6UWY2 283 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 STAC2Q6ZMT1 411 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 DPPA2Q7Z7J5 298 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 ZBTB46Q86UZ6 589 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 RANBP3LQ86VV4 465 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-213ENST00000480102 RNF113BQ8IZP6 322 aaKnown RBP4.33□□□□□ -1.72
PTCD3-213ENST00000480102 LRRC75A-AS1Q8N1F1 130 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 CLEC4FQ8N1N0 589 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 CLIP4Q8N3C7 705 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF614Q8N883 585 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 POMGNT2Q8NAT1 580 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF563Q8TA94 476 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 IGFBPL1Q8WX77 278 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 MAL2Q969L2 176 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF524Q96C55 264 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 LURAP1Q96LR2 239 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 HS6ST2Q96MM7 605 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 MUS81Q96NY9 551 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 LRRC37BQ96QE4 947 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 SEPHS2Q99611 448 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 FOXC2Q99958 501 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 ECSITQ9BQ95 431 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 NAA11Q9BSU3 229 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-213ENST00000480102 PRRG4Q9BZD6 226 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 UCK2Q9BZX2 261 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 QRSL1Q9H0R6 528 aaKnown RBP4.33□□□□□ -1.72
PTCD3-213ENST00000480102 DENND2DQ9H6A0 471 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-213ENST00000480102 ZMAT4Q9H898 229 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms