RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 CEACAM7Q14002 265 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 NKPD1Q17RQ9 610 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 TRMT5Q32P41 509 aaKnown RBP6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 UNC50Q53HI1 259 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 SPDYAQ5MJ70 313 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 TMEM225Q6GV28 225 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 NIPAL3Q6P499 406 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 EMBQ6PCB8 327 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 GPRIN3Q6ZVF9 776 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 EIF3MQ7L2H7 374 aaKnown RBP6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 ZSCAN4Q8NAM6 433 aaPredicted RBP6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 OR10S1Q8NGN2 331 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 ZFP28Q8NHY6 868 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF563Q8TA94 476 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 ADAMTS15Q8TE58 950 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 DYRK2Q92630 601 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 DDIT4LQ96D03 193 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 ACTRT3Q9BYD9 372 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 C16orf95Q9H693 158 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 GPR35Q9HC97 309 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 ZCCHC3Q9NUD5 404 aaKnown RBP6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 DECR2Q9NUI1 292 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 GPATCH2Q9NW75 528 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 GPR160Q9UJ42 338 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 OSGIN1Q9UJX0 560 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 TMED7Q9Y3B3 224 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 JRKLQ9Y4A0 524 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 POMT1Q9Y6A1 747 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 SACSQ9NZJ4 4579 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 DNAH3Q8TD57 4116 aa6.16□□□□□ -1.42
SPTLC1-205ENST00000477888 ISPDA4D126 451 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 A8MT66 165 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 K7EIL1 84 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 EIF3HO15372 352 aaKnown RBP eCLIP6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 SUPT7LO94864 414 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 VAMP5O95183 116 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 MPIG6BO95866 241 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 GPIP06744 558 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 MELTFP08582 738 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 MAKP20794 623 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 EFNA1P20827 205 aaPredicted RBP6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 HTR3AP46098 478 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 CAPZA2P47755 286 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 IDH2P48735 452 aaKnown RBP6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 GALK2Q01415 458 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 DR1Q01658 176 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 PLAURQ03405 335 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 PIGFQ07326 219 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 POU4F2Q12837 409 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 PDE7AQ13946 482 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 GPR68Q15743 365 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 MAPK14Q16539 360 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 CEACAM16Q2WEN9 425 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF678Q5SXM1 525 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 BRD3OSQ6XYD6 125 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 Q6ZSV7 163 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 TRIM46Q7Z4K8 759 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 KIF18AQ8NI77 898 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 DACT3Q96B18 629 aaPredicted RBP6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 PPCDCQ96CD2 204 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 ELMOD3Q96FG2 381 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 FAM71F1Q96KD3 344 aaPredicted RBP6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 KCNA7Q96RP8 456 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 OSBPL9Q96SU4 736 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 TRIM31Q9BZY9 425 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 REEP4Q9H6H4 257 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 FN3KRPQ9HA64 309 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 SAP30LQ9HAJ7 183 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 PATZ1Q9HBE1 687 aaKnown RBP6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 SLCO1C1Q9NYB5 712 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 SH3BP4Q9P0V3 963 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 MKLN1Q9UL63 735 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 SNX24Q9Y343 169 aa6.15□□□□□ -1.42
SPTLC1-205ENST00000477888 DYNC2H1Q8NCM8 4307 aaKnown RBP6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 TRAV40A0A0B4J280 105 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 SLC22A23A1A5C7 686 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 FAM187AA6NFU0 413 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 ZNF99A8MXY4 864 aaPredicted RBP6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 AKAP10O43572 662 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 GPR137BO60478 399 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 SLC43A1O75387 559 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 STX11O75558 287 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 SASH3O75995 380 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 IGHV2-70P01814 119 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 ENO1P06733 434 aaKnown RBP6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 SBK2P0C263 348 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 CD79AP11912 226 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 FUT4P22083 530 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 TACR3P29371 465 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 MAGEA12P43365 314 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 CCT3P49368 545 aaKnown RBP6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 POLR2HP52434 150 aaKnown RBP6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 FOXA1P55317 472 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 KLF3P57682 345 aaPredicted RBP6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 SELENOVP59797 346 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 BPIFB3P59826 476 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 ETF1P62495 437 aaKnown RBP6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 RPS26P62854 115 aaKnown RBP6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 NAB1Q13506 487 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 DOC2BQ14184 412 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms