RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 ZNF99A8MXY4 864 aaPredicted RBP17.31■□□□□ 0.36
PDLIM1-202ENST00000477757 FTCDNL1E5RQL4 147 aa17.31■□□□□ 0.36
PDLIM1-202ENST00000477757 HLA-HP01893 362 aa17.31■□□□□ 0.36
PDLIM1-202ENST00000477757 TFPTP0C1Z6 253 aa17.31■□□□□ 0.36
PDLIM1-202ENST00000477757 PNMTP11086 282 aa17.31■□□□□ 0.36
PDLIM1-202ENST00000477757 ZNF14P17017 642 aaPredicted RBP17.31■□□□□ 0.36
PDLIM1-202ENST00000477757 GATA3P23771 443 aa17.31■□□□□ 0.36
PDLIM1-202ENST00000477757 SYPL1Q16563 259 aa17.31■□□□□ 0.36
PDLIM1-202ENST00000477757 GSG1Q2KHT4 349 aa17.31■□□□□ 0.36
PDLIM1-202ENST00000477757 TRMT5Q32P41 509 aaKnown RBP17.31■□□□□ 0.36
PDLIM1-202ENST00000477757 ZCCHC23Q6ZST2 131 aa17.31■□□□□ 0.36
PDLIM1-202ENST00000477757 ANKRD46Q86W74 232 aa17.31■□□□□ 0.36
PDLIM1-202ENST00000477757 GSPT2Q8IYD1 628 aaKnown RBP17.31■□□□□ 0.36
PDLIM1-202ENST00000477757 C22orf15Q8WYQ4 148 aa17.31■□□□□ 0.36
PDLIM1-202ENST00000477757 ZNF75AQ96N20 296 aa17.31■□□□□ 0.36
PDLIM1-202ENST00000477757 MARCOQ9UEW3 520 aaPredicted RBP17.31■□□□□ 0.36
PDLIM1-202ENST00000477757 OPN4Q9UHM6 478 aa17.31■□□□□ 0.36
PDLIM1-202ENST00000477757 A0A096LPI6 279 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 A0A1W2PPW3 197 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 IGHV2-5P01817 119 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 NAT2P11245 290 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 IL7RP16871 459 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 ZNF43P17038 809 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 PRTN3P24158 256 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 MAD2L1Q13257 205 aaPredicted RBP17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 OCLNQ16625 522 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 MMEL1Q495T6 779 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 AVPI1Q5T686 147 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 GKAP1Q5VSY0 366 aaPredicted RBP17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 WBP2NLQ6ICG8 309 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 LRRC74BQ6ZQY2 392 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 KDM8Q8N371 416 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 PIK3C3Q8NEB9 887 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 KIF18AQ8NI77 898 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 TUBGCP3Q96CW5 907 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 LRRC58Q96CX6 371 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 GRPEL1Q9HAV7 217 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 NOP53Q9NZM5 478 aaKnown RBP17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 B3GAT1Q9P2W7 334 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 FZR1Q9UM11 496 aa17.3■□□□□ 0.36
PDLIM1-202ENST00000477757 DSPPQ9NZW4 1301 aa17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 PRSS51A0A1B0GVH4 220 aa17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 CDHR4A6H8M9 788 aa17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 DNAJC9-AS1A6NH13 148 aa17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 AHSA1O95433 338 aa17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 DBIP07108 87 aaKnown RBP17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 CHI3L1P36222 383 aaPredicted RBP17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 MAGEB1P43366 347 aa17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 IL13RA1P78552 427 aa17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 MVKQ03426 396 aa17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 WHAMMP3Q1A5X7 153 aa17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 RBMS3Q6XE24 437 aaKnown RBP17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 TMEM123Q8N131 208 aa17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 CADM2Q8N3J6 435 aa17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 SIGLECL1Q8N7X8 197 aa17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 MFSD8Q8NHS3 518 aa17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 OR2M2Q96R28 347 aa17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 SLC35A5Q9BS91 424 aa17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 C7orf69Q9H7B7 122 aa17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 MTHFD2LQ9H903 347 aaPredicted RBP17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 RLIMQ9NVW2 624 aa17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 ARMCX1Q9P291 453 aa17.29■□□□□ 0.36
PDLIM1-202ENST00000477757 POM121CA8CG34 1229 aa17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 FZD7O75084 574 aa17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 CPSF4O95639 269 aaKnown RBP17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 C1QCP02747 245 aa17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 GKN3PP0CG01 181 aa17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 CD79AP11912 226 aa17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 ZFP36P26651 326 aaKnown RBP17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 ACAA2P42765 397 aaKnown RBP17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 COPZ1P61923 177 aa17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 GALK2Q01415 458 aa17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 EMX2Q04743 252 aa17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 DOK3Q7L591 496 aa17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 C17orf53Q8N3J3 647 aaPredicted RBP17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 STK35Q8TDR2 534 aa17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 PTDSS2Q9BVG9 487 aa17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 C1QTNF5Q9BXJ0 243 aa17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 TXLNGYQ9BZA5 131 aa17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 DPY30Q9C005 99 aa17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 SLITRK2Q9H156 845 aa17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 MED29Q9NX70 200 aa17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 DUSP13Q9UII6 198 aa17.28■□□□□ 0.36
PDLIM1-202ENST00000477757 AKAP8O43823 692 aaKnown RBP17.27■□□□□ 0.36
PDLIM1-202ENST00000477757 CDC14BO60729 498 aa17.27■□□□□ 0.36
PDLIM1-202ENST00000477757 KRT4P19013 534 aa17.27■□□□□ 0.36
PDLIM1-202ENST00000477757 GTF2E2P29084 291 aaKnown RBP17.27■□□□□ 0.36
PDLIM1-202ENST00000477757 ALDH3A1P30838 453 aa17.27■□□□□ 0.36
PDLIM1-202ENST00000477757 GLIPR1L2Q4G1C9 344 aa17.27■□□□□ 0.36
PDLIM1-202ENST00000477757 ANXA8L1Q5VT79 327 aa17.27■□□□□ 0.36
PDLIM1-202ENST00000477757 ZNF627Q7L945 461 aa17.27■□□□□ 0.36
PDLIM1-202ENST00000477757 RNF130Q86XS8 419 aa17.27■□□□□ 0.36
PDLIM1-202ENST00000477757 C4orf33Q8N1A6 199 aa17.27■□□□□ 0.36
PDLIM1-202ENST00000477757 C1orf147Q96MC9 270 aaPredicted RBP17.27■□□□□ 0.36
PDLIM1-202ENST00000477757 OXGR1Q96P68 337 aa17.27■□□□□ 0.36
PDLIM1-202ENST00000477757 SEC14L4Q9UDX3 406 aa17.27■□□□□ 0.36
PDLIM1-202ENST00000477757 SLC7A8Q9UHI5 535 aa17.27■□□□□ 0.36
PDLIM1-202ENST00000477757 C17orf100A8MU93 164 aa17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 TRAF3IP2O43734 574 aaPredicted RBP17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 ARRB2P32121 409 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms