RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 POLE3Q9NRF9 147 aa12.2□□□□□ -0.46
HDAC7-221ENST00000477203 PILRBQ9UKJ0 227 aa12.2□□□□□ -0.46
HDAC7-221ENST00000477203 SLC6A5Q9Y345 797 aa12.2□□□□□ -0.46
HDAC7-221ENST00000477203 IGKV3D-11A0A0A0MRZ8 115 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 TMEM129A0AVI4 362 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 HMX3A6NHT5 357 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 IL33O95760 270 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 GPR143P51810 404 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 LTBQ06643 244 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 SLC25A30Q5SVS4 291 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 ZBTB44Q8NCP5 570 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 DIRAS2Q96HU8 199 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 SDHCQ99643 169 aaPredicted RBP12.19□□□□□ -0.46
HDAC7-221ENST00000477203 GNG8Q9UK08 70 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 RARRES3Q9UL19 164 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 DMXL1Q9Y485 3027 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 LY6G6EA0A0G2JKS1 128 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 GABRPO00591 440 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 AKAP8O43823 692 aaKnown RBP12.19□□□□□ -0.46
HDAC7-221ENST00000477203 SBK2P0C263 348 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 CCL4P13236 92 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 EGR4Q05215 589 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 C19orf48Q6RUI8 117 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 QSOX2Q6ZRP7 698 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 OR4M2Q8NGB6 313 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 OR5M1Q8NGP8 315 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 IFI44Q8TCB0 444 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 HOXB13Q92826 284 aaPredicted RBP12.19□□□□□ -0.46
HDAC7-221ENST00000477203 OR1F2PQ96R84 312 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 C1QTNF6Q9BXI9 259 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 GON7Q9BXV9 100 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 ERVMER34-1Q9H9K5 563 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 U3KQA8 63 aa12.19□□□□□ -0.46
HDAC7-221ENST00000477203 A0A1B0GTQ1 180 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 A0A1W2PQ09 198 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 ANKRD61A6NGH8 418 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 SHOXO15266 292 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 IFNGP01579 166 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 TFP02787 698 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 CELA2AP08217 269 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 ZNF28P17035 718 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 MYL9P24844 172 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 CXCR1P25024 350 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 CLVS2Q5SYC1 327 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 WBP2NLQ6ICG8 309 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 FAM131AQ6UXB0 335 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 TMPRSS11AQ6ZMR5 421 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 GID4Q8IVV7 300 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 OR1N1Q8NGS0 311 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 TAAR8Q969N4 342 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 MARC2Q969Z3 335 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 ZNF649Q9BS31 505 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 ADGRL4Q9HBW9 690 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 NUP50Q9UKX7 468 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 SF3B6Q9Y3B4 125 aaKnown RBP12.18□□□□□ -0.46
HDAC7-221ENST00000477203 MMACHCQ9Y4U1 282 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 MN1Q10571 1320 aaPredicted RBP12.18□□□□□ -0.46
HDAC7-221ENST00000477203 CFAP47Q6ZTR5 3102 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 TRBV11-1A0A0K0K1C0 115 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 EFCAB7A8K855 629 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 DCTN6O00399 190 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 SHC1P29353 583 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 CDKN2AP42771 156 aaKnown RBP12.18□□□□□ -0.46
HDAC7-221ENST00000477203 CTBP2P56545 445 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 PAPD4Q6PIY7 484 aaKnown RBP12.18□□□□□ -0.46
HDAC7-221ENST00000477203 UBALD2Q8IYN6 164 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 DNAJA4Q8WW22 397 aaPredicted RBP12.18□□□□□ -0.46
HDAC7-221ENST00000477203 FBXW5Q969U6 566 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 PDCD1LG2Q9BQ51 273 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 SLC30A2Q9BRI3 323 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 RAB33BQ9H082 229 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 ZNF768Q9H5H4 540 aaKnown RBP12.18□□□□□ -0.46
HDAC7-221ENST00000477203 PEX16Q9Y5Y5 336 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 PTPRZ1P23471 2315 aaPredicted RBP12.18□□□□□ -0.46
HDAC7-221ENST00000477203 GVINP1Q7Z2Y8 2422 aa12.18□□□□□ -0.46
HDAC7-221ENST00000477203 LIMK1P53667 647 aa12.17□□□□□ -0.46
HDAC7-221ENST00000477203 PSMD4P55036 377 aaKnown RBP12.17□□□□□ -0.46
HDAC7-221ENST00000477203 OR10A3P58181 314 aa12.17□□□□□ -0.46
HDAC7-221ENST00000477203 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.17□□□□□ -0.46
HDAC7-221ENST00000477203 RNASE12Q5GAN4 147 aaKnown RBP12.17□□□□□ -0.46
HDAC7-221ENST00000477203 VASNQ6EMK4 673 aa12.17□□□□□ -0.46
HDAC7-221ENST00000477203 WDR74Q6RFH5 385 aaPredicted RBP12.17□□□□□ -0.46
HDAC7-221ENST00000477203 ARSKQ6UWY0 536 aa12.17□□□□□ -0.46
HDAC7-221ENST00000477203 LINC00299Q6ZSB3 139 aa12.17□□□□□ -0.46
HDAC7-221ENST00000477203 LSM14AQ8ND56 463 aaKnown RBP12.17□□□□□ -0.46
HDAC7-221ENST00000477203 OR5W2Q8NH69 310 aa12.17□□□□□ -0.46
HDAC7-221ENST00000477203 METTL21AQ8WXB1 218 aa12.17□□□□□ -0.46
HDAC7-221ENST00000477203 TIMP4Q99727 224 aa12.17□□□□□ -0.46
HDAC7-221ENST00000477203 CRB3Q9BUF7 120 aa12.17□□□□□ -0.46
HDAC7-221ENST00000477203 ZNF426Q9BUY5 554 aa12.17□□□□□ -0.46
HDAC7-221ENST00000477203 CCDC59Q9P031 241 aaKnown RBP12.17□□□□□ -0.46
HDAC7-221ENST00000477203 MED11Q9P086 117 aa12.17□□□□□ -0.46
HDAC7-221ENST00000477203 GSTK1Q9Y2Q3 226 aa12.17□□□□□ -0.46
HDAC7-221ENST00000477203 SLC22A31A6NKX4 558 aa12.17□□□□□ -0.46
HDAC7-221ENST00000477203 SDHBP21912 280 aa12.17□□□□□ -0.46
HDAC7-221ENST00000477203 EVI2BP34910 448 aa12.17□□□□□ -0.46
HDAC7-221ENST00000477203 EMP2P54851 167 aa12.17□□□□□ -0.46
HDAC7-221ENST00000477203 RNF4P78317 190 aa12.17□□□□□ -0.46
HDAC7-221ENST00000477203 ALG10Q5BKT4 473 aa12.17□□□□□ -0.46
HDAC7-221ENST00000477203 IDNKQ5T6J7 187 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms