RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 PCDHB10Q9UN67 800 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 CMAHPQ9Y471 501 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 PCDHB14Q9Y5E9 798 aa10.27□□□□□ -0.77
HDAC6-219ENST00000476625 E9PBE3 544 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 M0R082 166 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 M0R233 179 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 PPIHO43447 177 aaKnown RBP10.26□□□□□ -0.77
HDAC6-219ENST00000476625 TRAF3IP2O43734 574 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-219ENST00000476625 RP2O75695 350 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 CLPTM1O96005 669 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 ERCC1P07992 297 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-219ENST00000476625 NUDT7P0C024 238 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 TFPTP0C1Z6 253 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 B4GALT1P15291 398 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 NCF2P19878 526 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-219ENST00000476625 S100A3P33764 101 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 ETV4P43268 484 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 ERVS71-1P61550 626 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 MVKQ03426 396 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 MAD2L1Q13257 205 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-219ENST00000476625 C3orf36Q3SXR2 165 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 ANXA8L1Q5VT79 327 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 GPR137CQ8N3F9 429 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 ZDHHC22Q8N966 263 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 ZNF417Q8TAU3 575 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 FAM216AQ8WUB2 273 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 OIT3Q8WWZ8 545 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 TESCQ96BS2 214 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 DUX5Q96PT3 197 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 PANX1Q96RD7 426 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 ZNF587Q96SQ5 575 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-219ENST00000476625 SORT1Q99523 831 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 MTHFD2LQ9H903 347 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-219ENST00000476625 G6PC2Q9NQR9 355 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 PNPOQ9NVS9 261 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 B3GNT2Q9NY97 397 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 USP22Q9UPT9 525 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 RASD1Q9Y272 281 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 CACNG2Q9Y698 323 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 DSPPQ9NZW4 1301 aa10.26□□□□□ -0.77
HDAC6-219ENST00000476625 IGKV1D-42A0A075B6H8 117 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 LRRN3E7EW58 273 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 RPL36A-HNRNPH2H7BZ11 118 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 SYNGR3O43761 229 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 SLC43A1O75387 559 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 AHSA1O95433 338 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 ZNF35P13682 527 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 ZNF14P17017 642 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-219ENST00000476625 ZNF43P17038 809 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 GRPRP30550 384 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 ARR3P36575 388 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 PTDSS1P48651 473 aaKnown RBP10.25□□□□□ -0.77
HDAC6-219ENST00000476625 RAB39AQ14964 217 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 GSTA3Q16772 222 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 PEX5LQ8IYB4 626 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 LRRC34Q8IZ02 419 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 PAQR4Q8N4S7 273 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-219ENST00000476625 ZNF418Q8TF45 676 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-219ENST00000476625 TAAR8Q969N4 342 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 VPS33AQ96AX1 596 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 TXNDC15Q96J42 360 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 TMPRSS13Q9BYE2 586 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 MED29Q9NX70 200 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 DUSP13Q9UII6 198 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 BTNL2Q9UIR0 455 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 PPIAL4AQ9Y536 164 aa10.25□□□□□ -0.77
HDAC6-219ENST00000476625 A0A0A6YYJ9 748 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 SLCO1B7G3V0H7 640 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 MS4A18H0YCH9 400 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 TMPRSS2O15393 492 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 TYROBPO43914 113 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 SERPINI2O75830 405 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 PNPP00491 289 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 FAM157BP0CG42 384 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 CCL2P13500 99 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 UQCRBP14927 111 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 ACHEP22303 614 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 HTR2AP28223 471 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 GIPRP48546 466 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 ARFIP2P53365 341 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 SH3BGRP55822 239 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-219ENST00000476625 ABCE1P61221 599 aaKnown RBP10.24□□□□□ -0.77
HDAC6-219ENST00000476625 GLO1Q04760 184 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 FXNQ16595 210 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 MS4A18Q3C1V0 323 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 LIN52Q52LA3 116 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 ZNF813Q6ZN06 617 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 ZNF584Q8IVC4 421 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 NUDCD3Q8IVD9 361 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 FAM169BQ8N8A8 192 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 OR51F2Q8NH61 342 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 MFSD8Q8NHS3 518 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 SGMS2Q8NHU3 365 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 SLC38A5Q8WUX1 472 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 ZFAND2BQ8WV99 257 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 RDH5Q92781 318 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 TMEM19Q96HH6 336 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 OXGR1Q96P68 337 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 OR52E6Q96RD3 313 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 PIF1Q9H611 641 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms