RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 J3QLI3 93 aa14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 NPIPB7O75200 414 aa14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 DEAF1O75398 565 aaPredicted RBP14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 FAM153BP0C7A2 387 aa14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 PNMTP11086 282 aa14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 NAT2P11245 290 aa14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 ZNF14P17017 642 aaPredicted RBP14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 ZNF43P17038 809 aa14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 ARRB2P32121 409 aa14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 CHI3L1P36222 383 aaPredicted RBP14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 ACAA2P42765 397 aaKnown RBP14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 EMX2Q04743 252 aa14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 ZP4Q12836 540 aa14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 MAD2L1Q13257 205 aaPredicted RBP14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 FXNQ16595 210 aa14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 TRMT5Q32P41 509 aaKnown RBP14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 AVPI1Q5T686 147 aa14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 LRRC74BQ6ZQY2 392 aa14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 ZNF75AQ96N20 296 aa14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 MECRQ9BV79 373 aa14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 DPY30Q9C005 99 aa14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 ZNF385DQ9H6B1 395 aa14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 NTN4Q9HB63 628 aa14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 ASIC5Q9NY37 505 aa14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 NOP53Q9NZM5 478 aaKnown RBP14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 CORINQ9Y5Q5 1042 aa14.07□□□□□ -0.16
APOBEC3F-203ENST00000476513 ZNF99A8MXY4 864 aaPredicted RBP14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 FTCDNL1E5RQL4 147 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 PRSS23O95084 383 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 FSHBP01225 129 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 SHBGP04278 402 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 DBIP07108 87 aaKnown RBP14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 FPR2P25090 351 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 MVKQ03426 396 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 GSG1Q2KHT4 349 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 ANXA8L1Q5VT79 327 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 DCAF12L2Q5VW00 463 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 WBP2NLQ6ICG8 309 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 RNF130Q86XS8 419 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 MFSD8Q8NHS3 518 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 DVL3Q92997 716 aaPredicted RBP14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 SLC25A36Q96CQ1 311 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 SLC35A5Q9BS91 424 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 C1QTNF5Q9BXJ0 243 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 UNKLQ9H9P5 680 aaKnown RBP14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 B3GAT1Q9P2W7 334 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 SEC14L4Q9UDX3 406 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 OPN4Q9UHM6 478 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 DUSP13Q9UII6 198 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 ZDHHC2Q9UIJ5 367 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 PRDM4Q9UKN5 801 aa14.06□□□□□ -0.16
APOBEC3F-203ENST00000476513 WNK2Q9Y3S1 2297 aa14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 A0A1W2PPW3 197 aa14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 CDHR4A6H8M9 788 aa14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 CDC14BO60729 498 aa14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 AHSA1O95433 338 aa14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 CD79AP11912 226 aa14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 MAGEB1P43366 347 aa14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 COPZ1P61923 177 aa14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 RPS23P62266 143 aaKnown RBP14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 PIGFQ07326 219 aa14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 CASP8Q14790 479 aa14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 PHYHD1Q5SRE7 291 aa14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 GKAP1Q5VSY0 366 aaPredicted RBP14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 GSPT2Q8IYD1 628 aaKnown RBP14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 TMEM123Q8N131 208 aa14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 STK35Q8TDR2 534 aa14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 RAB39BQ96DA2 213 aa14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 OXGR1Q96P68 337 aa14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 OR2M2Q96R28 347 aa14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 PTDSS2Q9BVG9 487 aa14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 C7orf69Q9H7B7 122 aa14.05□□□□□ -0.16
APOBEC3F-203ENST00000476513 PRKDCP78527 4128 aaKnown RBP14.04□□□□□ -0.16
APOBEC3F-203ENST00000476513 A0A096LPI6 279 aa14.04□□□□□ -0.16
APOBEC3F-203ENST00000476513 SMIM23A6NLE4 172 aa14.04□□□□□ -0.16
APOBEC3F-203ENST00000476513 M0R3G1 203 aa14.04□□□□□ -0.16
APOBEC3F-203ENST00000476513 RPS5P46782 204 aaKnown RBP14.04□□□□□ -0.16
APOBEC3F-203ENST00000476513 C1DQ13901 141 aaKnown RBP14.04□□□□□ -0.16
APOBEC3F-203ENST00000476513 TUSC1Q2TAM9 212 aa14.04□□□□□ -0.16
APOBEC3F-203ENST00000476513 ALKBH6Q3KRA9 238 aa14.04□□□□□ -0.16
APOBEC3F-203ENST00000476513 GLIPR1L2Q4G1C9 344 aa14.04□□□□□ -0.16
APOBEC3F-203ENST00000476513 ATG16L1Q676U5 607 aa14.04□□□□□ -0.16
APOBEC3F-203ENST00000476513 VRK2Q86Y07 508 aa14.04□□□□□ -0.16
APOBEC3F-203ENST00000476513 PEX5LQ8IYB4 626 aa14.04□□□□□ -0.16
APOBEC3F-203ENST00000476513 SIGLECL1Q8N7X8 197 aa14.04□□□□□ -0.16
APOBEC3F-203ENST00000476513 PIK3C3Q8NEB9 887 aa14.04□□□□□ -0.16
APOBEC3F-203ENST00000476513 VPS37AQ8NEZ2 397 aa14.04□□□□□ -0.16
APOBEC3F-203ENST00000476513 LRRC58Q96CX6 371 aa14.04□□□□□ -0.16
APOBEC3F-203ENST00000476513 DUX5Q96PT3 197 aa14.04□□□□□ -0.16
APOBEC3F-203ENST00000476513 ZNF346Q9UL40 294 aaKnown RBP14.04□□□□□ -0.16
APOBEC3F-203ENST00000476513 IGHV2-5P01817 119 aa14.03□□□□□ -0.16
APOBEC3F-203ENST00000476513 NR2F1P10589 423 aa14.03□□□□□ -0.16
APOBEC3F-203ENST00000476513 PRG2P13727 222 aa14.03□□□□□ -0.16
APOBEC3F-203ENST00000476513 PRTN3P24158 256 aa14.03□□□□□ -0.16
APOBEC3F-203ENST00000476513 ZFP36P26651 326 aaKnown RBP14.03□□□□□ -0.16
APOBEC3F-203ENST00000476513 CCL8P80075 99 aa14.03□□□□□ -0.16
APOBEC3F-203ENST00000476513 GALK2Q01415 458 aa14.03□□□□□ -0.16
APOBEC3F-203ENST00000476513 EGR4Q05215 589 aa14.03□□□□□ -0.16
APOBEC3F-203ENST00000476513 CHI3L2Q15782 390 aa14.03□□□□□ -0.16
APOBEC3F-203ENST00000476513 SMU1Q2TAY7 513 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms