RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 CDH11P55287 796 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 PITPNAQ00169 270 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 OC90Q02509 493 aaPredicted RBP11.92□□□□□ -0.5
CCNL1-216ENST00000475298 ECH1Q13011 328 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 MAPK14Q16539 360 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 SLC6A19Q695T7 634 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 HEPHL1Q6MZM0 1159 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 MRGPREQ86SM8 312 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 OR6V1Q8N148 313 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 ZFPM2Q8WW38 1151 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 GABRG3Q99928 467 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 NKX2-4Q9H2Z4 354 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 SDHAF3Q9NRP4 125 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 DHCR7Q9UBM7 475 aaKnown RBP11.92□□□□□ -0.5
CCNL1-216ENST00000475298 WDR45Q9Y484 360 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 MYO15AQ9UKN7 3530 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 OR6C74A6NCV1 312 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 LRRC72A6NJI9 287 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 TMEM200CA6NKL6 621 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 FAM183AA6NL82 134 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 S100A9P06702 114 aaKnown RBP11.92□□□□□ -0.5
CCNL1-216ENST00000475298 GKN3PP0CG01 181 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 CBR1P16152 277 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 CNR1P21554 472 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 TBXA2RP21731 343 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 IFNGR2P38484 337 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 FNTBP49356 437 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 HYAL1Q12794 435 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 NFATC4Q14934 902 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 CCDC157Q569K6 752 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 FAM69AQ5T7M9 428 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 FCRL6Q6DN72 434 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 BOLLQ8N9W6 283 aaKnown RBP11.92□□□□□ -0.5
CCNL1-216ENST00000475298 TMEM52Q8NDY8 209 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 OR4K14Q8NGD5 310 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 OR5T3Q8NGG3 340 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 OR5M1Q8NGP8 315 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 ACOT11Q8WXI4 607 aaPredicted RBP11.92□□□□□ -0.5
CCNL1-216ENST00000475298 ADAP2Q9NPF8 381 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 KLHL28Q9NXS3 571 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 TAS2R5Q9NYW4 299 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 CALML5Q9NZT1 146 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 MBD2Q9UBB5 411 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 FBXL3Q9UKT7 428 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 PCDHGA5Q9Y5G8 931 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 C5orf52A6NGY3 159 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 SURF4O15260 269 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 CREBL2O60519 120 aaPredicted RBP11.91□□□□□ -0.5
CCNL1-216ENST00000475298 SNRPBP14678 240 aaKnown RBP11.91□□□□□ -0.5
CCNL1-216ENST00000475298 NOS3P29474 1203 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 ARFIP1P53367 373 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 DLX2Q07687 328 aaPredicted RBP11.91□□□□□ -0.5
CCNL1-216ENST00000475298 GPR18Q14330 331 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 HABP2Q14520 560 aaPredicted RBP11.91□□□□□ -0.5
CCNL1-216ENST00000475298 CSRP2Q16527 193 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 ELFN2Q5R3F8 820 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 CDC73Q6P1J9 531 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 TPRA1Q86W33 373 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 IZUMO1Q8IYV9 350 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 TMEM185AQ8NFB2 350 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 OR52B4Q8NGK2 314 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 SAMD8Q96LT4 415 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 ZNF285Q96NJ3 590 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 TIMP4Q99727 224 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 NOX3Q9HBY0 568 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 DAPP1Q9UN19 280 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 CAMK2AQ9UQM7 478 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 EXOGQ9Y2C4 368 aaKnown RBP11.91□□□□□ -0.5
CCNL1-216ENST00000475298 A0A1B0GW55 424 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 ZC3H12DA2A288 527 aaKnown RBP11.91□□□□□ -0.5
CCNL1-216ENST00000475298 SOCS6O14544 535 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 CTDSPLO15194 276 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 FBP1P09467 338 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 DUX4L2P0CJ85 424 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 DUX4L3P0CJ86 424 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 DUX4L4P0CJ87 422 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 DUX4L5P0CJ88 424 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 DUX4L6P0CJ89 424 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 DUX4L7P0CJ90 424 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 ACHEP22303 614 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 LSSP48449 732 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 UBE2IP63279 158 aaKnown RBP11.91□□□□□ -0.5
CCNL1-216ENST00000475298 FCRLBQ6BAA4 426 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 WDR88Q6ZMY6 472 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 ZNF620Q6ZNG0 422 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 ARMC10Q8N2F6 343 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 OR2L13Q8N349 312 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 NT5CQ8TCD5 201 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 GCDHQ92947 438 aaPredicted RBP11.91□□□□□ -0.5
CCNL1-216ENST00000475298 WDR92Q96MX6 357 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 DUX4Q9UBX2 424 aa11.91□□□□□ -0.5
CCNL1-216ENST00000475298 SPEGQ15772 3267 aa11.9□□□□□ -0.5
CCNL1-216ENST00000475298 GON4LQ3T8J9 2241 aa11.9□□□□□ -0.5
CCNL1-216ENST00000475298 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.9□□□□□ -0.5
CCNL1-216ENST00000475298 PEX12O00623 359 aa11.9□□□□□ -0.5
CCNL1-216ENST00000475298 UBE2CO00762 179 aa11.9□□□□□ -0.5
CCNL1-216ENST00000475298 KLF4O43474 513 aa11.9□□□□□ -0.5
CCNL1-216ENST00000475298 RNF224P0DH78 156 aa11.9□□□□□ -0.5
CCNL1-216ENST00000475298 PAICSP22234 425 aaKnown RBP11.9□□□□□ -0.5
CCNL1-216ENST00000475298 FPR3P25089 353 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms