RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 MGARPQ8TDB4 240 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 EPS8L3Q8TE67 593 aaKnown RBP10.84□□□□□ -0.67
SKA3-206ENST00000475251 MRPL37Q9BZE1 423 aaKnown RBP10.84□□□□□ -0.67
SKA3-206ENST00000475251 ZNF385DQ9H6B1 395 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 GPR35Q9HC97 309 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 TREM2Q9NZC2 230 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 CALML5Q9NZT1 146 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 BTNL2Q9UIR0 455 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 FBXL3Q9UKT7 428 aa10.84□□□□□ -0.67
SKA3-206ENST00000475251 ZNF346Q9UL40 294 aaKnown RBP10.84□□□□□ -0.67
SKA3-206ENST00000475251 MEGF8Q7Z7M0 2845 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 TENM1Q9UKZ4 2725 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 A0A0G2JMP0 313 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 A0A0X1KG70 313 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 J3QLI3 93 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 PPIHO43447 177 aaKnown RBP10.83□□□□□ -0.68
SKA3-206ENST00000475251 NPIPB7O75200 414 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 HPXP02790 462 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 PNMTP11086 282 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 FOXL1Q12952 345 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 C1DQ13901 141 aaKnown RBP10.83□□□□□ -0.68
SKA3-206ENST00000475251 LARS2Q15031 903 aaKnown RBP10.83□□□□□ -0.68
SKA3-206ENST00000475251 GSG1Q2KHT4 349 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 ACSM5Q6NUN0 579 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 SNX32Q86XE0 403 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 BPIFB2Q8N4F0 458 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 OR4M2Q8NGB6 313 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 OR52P1PQ8NH57 321 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 SLC25A36Q96CQ1 311 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 RAB39BQ96DA2 213 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 CCDC115Q96NT0 180 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 OXGR1Q96P68 337 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 PANX1Q96RD7 426 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 DENND2DQ9H6A0 471 aaPredicted RBP10.83□□□□□ -0.68
SKA3-206ENST00000475251 NTN4Q9HB63 628 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 ZNF275Q9NSD4 429 aaPredicted RBP10.83□□□□□ -0.68
SKA3-206ENST00000475251 P2RX2Q9UBL9 471 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 GPR160Q9UJ42 338 aa10.83□□□□□ -0.68
SKA3-206ENST00000475251 CCDC154A6NI56 674 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 E9PBE3 544 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 AIM2O14862 343 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 OR2T1O43869 369 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 GKN3PP0CG01 181 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 CD79AP11912 226 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 TCN1P20061 433 aaPredicted RBP10.82□□□□□ -0.68
SKA3-206ENST00000475251 COL8A2P25067 703 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 S100A3P33764 101 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 ACAA2P42765 397 aaKnown RBP10.82□□□□□ -0.68
SKA3-206ENST00000475251 SELENOVP59797 346 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 SPANXN4Q5MJ08 99 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 RNF220Q5VTB9 566 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 C5orf46Q6UWT4 87 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 C1QL2Q7Z5L3 287 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 GSPT2Q8IYD1 628 aaKnown RBP10.82□□□□□ -0.68
SKA3-206ENST00000475251 LRRC34Q8IZ02 419 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 KIRREL3Q8IZU9 778 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 RIBC1Q8N443 379 aaPredicted RBP10.82□□□□□ -0.68
SKA3-206ENST00000475251 EIF1ADQ8N9N8 165 aaKnown RBP10.82□□□□□ -0.68
SKA3-206ENST00000475251 NANPQ8TBE9 248 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 SYT3Q9BQG1 590 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 ZNF747Q9BV97 191 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 AKTIPQ9H8T0 292 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 B3GAT2Q9NPZ5 323 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 DDX28Q9NUL7 540 aaKnown RBP10.82□□□□□ -0.68
SKA3-206ENST00000475251 RLIMQ9NVW2 624 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 SLC17A7Q9P2U7 560 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 ZNF232Q9UNY5 417 aa10.82□□□□□ -0.68
SKA3-206ENST00000475251 LOC105371242A0A075B767 164 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 A0A1W2PPW3 197 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 ZNF503-AS2A6NEH8 195 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 FTCDNL1E5RQL4 147 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 TMPRSS2O15393 492 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 KRT75O95678 551 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 RAB36O95755 333 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 MYZAPP0CAP1 466 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 ZNF35P13682 527 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 GATA3P23771 443 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 FPR2P25090 351 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 ARRB2P32121 409 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 ALDH3B1P43353 468 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 RPS5P46782 204 aaKnown RBP10.81□□□□□ -0.68
SKA3-206ENST00000475251 CRISP3P54108 245 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 LMO4P61968 165 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 TEKQ02763 1124 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 PDCD2Q16342 344 aaPredicted RBP10.81□□□□□ -0.68
SKA3-206ENST00000475251 PDLIM3Q53GG5 364 aaPredicted RBP10.81□□□□□ -0.68
SKA3-206ENST00000475251 ZNF836Q6ZNA1 936 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 ZNF621Q6ZSS3 439 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 NET1Q7Z628 596 aaPredicted RBP10.81□□□□□ -0.68
SKA3-206ENST00000475251 KDM8Q8N371 416 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 TCP10LQ8TDR4 215 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 RHOXF2Q9BQY4 288 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 ZNF665Q9H7R5 613 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 G6PC2Q9NQR9 355 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 B3GNT2Q9NY97 397 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 SLC7A8Q9UHI5 535 aa10.81□□□□□ -0.68
SKA3-206ENST00000475251 LOC102725191A0A1B0GVB3 256 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 TLDC2A0PJX2 215 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 TMEM247A6NEH6 219 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 M0R3G1 203 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms