RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 CYBRD1Q53TN4 286 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 ENTPD8Q5MY95 495 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 OTUD3Q5T2D3 398 aaPredicted RBP13.32□□□□□ -0.28
VARS-223ENST00000474643 C9orf135Q5VTT2 229 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 GPAT4Q86UL3 456 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 CARM1Q86X55 608 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 DEFB107AQ8IZN7 70 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 OR6T1Q8NGN1 323 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 POP5Q969H6 163 aaKnown RBP13.32□□□□□ -0.28
VARS-223ENST00000474643 FAM162AQ96A26 154 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 ADAD1Q96M93 576 aaKnown RBP13.32□□□□□ -0.28
VARS-223ENST00000474643 WFDC6Q9BQY6 131 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 LRMDAQ9H2I8 198 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 C12orf10Q9HB07 376 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 RAI1Q7Z5J4 1906 aaPredicted RBP13.32□□□□□ -0.28
VARS-223ENST00000474643 FREM1Q5H8C1 2179 aa13.32□□□□□ -0.28
VARS-223ENST00000474643 A0A1W2PR80 420 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 LIPT2A6NK58 231 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 ZNF716A6NP11 495 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 TMEM229AB2RXF0 380 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 RNF223E7ERA6 249 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 FMO6PO60774 539 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 RAMP1O60894 148 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 AKR7A3O95154 331 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 ZNF682O95780 498 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 EDNRAP25101 427 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 SLC25A3Q00325 362 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 IL1RL1Q01638 556 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 TNK1Q13470 666 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 TMEM225Q6GV28 225 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 ZNF613Q6PF04 617 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 PAQR6Q6TCH4 344 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 C5orf46Q6UWT4 87 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 DEF8Q6ZN54 512 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 RINLQ6ZS11 566 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 ABHD12BQ7Z5M8 362 aaPredicted RBP13.31□□□□□ -0.28
VARS-223ENST00000474643 RBM45Q8IUH3 476 aaKnown RBP13.31□□□□□ -0.28
VARS-223ENST00000474643 FBXL14Q8N1E6 418 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 C10orf53Q8N6V4 93 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 SLC38A4Q969I6 547 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 EPYCQ99645 322 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 MUC13Q9H3R2 512 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 GMPR2Q9P2T1 348 aaKnown RBP13.31□□□□□ -0.28
VARS-223ENST00000474643 CD300AQ9UGN4 299 aa13.31□□□□□ -0.28
VARS-223ENST00000474643 NSD1Q96L73 2696 aaPredicted RBP13.31□□□□□ -0.28
VARS-223ENST00000474643 A0A0B4J2E0 115 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 A0A1B0GX12 115 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 INAFM1C9JVW0 142 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 OR2T1O43869 369 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 DNAJC8O75937 253 aaPredicted RBP13.3□□□□□ -0.28
VARS-223ENST00000474643 BMP4P12644 408 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 CDH2P19022 906 aaPredicted RBP13.3□□□□□ -0.28
VARS-223ENST00000474643 TNFRSF1BP20333 461 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 PTNP21246 168 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 NUDT6P53370 316 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 SLC16A1P53985 500 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 CDH12P55289 794 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 TAS2R41P59536 307 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 SWT1Q5T5J6 900 aaKnown RBP13.3□□□□□ -0.28
VARS-223ENST00000474643 FKBP9P1Q75LS8 142 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 RNF148Q8N7C7 305 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 TMEM99Q8N816 258 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 OR4D11Q8NGI4 311 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 LILRB1Q8NHL6 650 aaPredicted RBP13.3□□□□□ -0.28
VARS-223ENST00000474643 MFSD8Q8NHS3 518 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 KTI12Q96EK9 354 aaPredicted RBP13.3□□□□□ -0.28
VARS-223ENST00000474643 CDRT15Q96T59 188 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 KCNS3Q9BQ31 491 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 FKRPQ9H9S5 495 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 NPAP1Q9NZP6 1156 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 MALT1Q9UDY8 824 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 EGFL7Q9UHF1 273 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 AMDHD2Q9Y303 409 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 ATP23Q9Y6H3 246 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 ABCA2Q9BZC7 2435 aa13.3□□□□□ -0.28
VARS-223ENST00000474643 USF3Q68DE3 2245 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 TRAV36DV7A0A075B6V5 113 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 A0A087WUJ7 227 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 TRAPPC13A5PLN9 417 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 TPST2O60704 377 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 WNT11O96014 354 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 DANCRP0C864 163 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 NCK1P16333 377 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 TCN1P20061 433 aaPredicted RBP13.29□□□□□ -0.28
VARS-223ENST00000474643 CBLP22681 906 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 IFNA8P32881 189 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 ACVR1BP36896 505 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 OR1E2P47887 323 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 FABP6P51161 128 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 CRYBA2P53672 197 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 SELENOWP63302 87 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 NPTX1Q15818 432 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 ZSCAN26Q16670 478 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 TTC33Q6PID6 262 aaPredicted RBP13.29□□□□□ -0.28
VARS-223ENST00000474643 ASRGL1Q7L266 308 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 AAED1Q7RTV5 226 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 MAPK1IP1LQ8NDC0 245 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 ADAMTS16Q8TE57 1224 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 IGFBPL1Q8WX77 278 aa13.29□□□□□ -0.28
VARS-223ENST00000474643 TRAF4Q9BUZ4 470 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms