RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 EPHX4Q8IUS5 362 aa12.15□□□□□ -0.46
USF1-205ENST00000473969 RNF113BQ8IZP6 322 aaKnown RBP12.15□□□□□ -0.46
USF1-205ENST00000473969 ZIC4Q8N9L1 334 aa12.15□□□□□ -0.46
USF1-205ENST00000473969 PFN4Q8NHR9 129 aa12.15□□□□□ -0.46
USF1-205ENST00000473969 S100PBPQ96BU1 408 aa12.15□□□□□ -0.46
USF1-205ENST00000473969 TRIM15Q9C019 465 aa12.15□□□□□ -0.46
USF1-205ENST00000473969 ANKRD19PQ9H560 264 aa12.15□□□□□ -0.46
USF1-205ENST00000473969 KRCC1Q9NPI7 259 aaPredicted RBP12.15□□□□□ -0.46
USF1-205ENST00000473969 MEPEQ9NQ76 525 aaPredicted RBP12.15□□□□□ -0.46
USF1-205ENST00000473969 SLC7A10Q9NS82 523 aa12.15□□□□□ -0.46
USF1-205ENST00000473969 MALT1Q9UDY8 824 aa12.15□□□□□ -0.46
USF1-205ENST00000473969 EDARQ9UNE0 448 aa12.15□□□□□ -0.46
USF1-205ENST00000473969 RCE1Q9Y256 329 aa12.15□□□□□ -0.46
USF1-205ENST00000473969 ZNF587BE7ETH6 402 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 MS4A18H0YCH9 400 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 hCG_2039718K7EN88 272 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 CTAG2O75638 210 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 ATP5HO75947 161 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 PDE5AO76074 875 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 FABP3P05413 133 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 IFI30P13284 250 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 CRYGSP22914 178 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 IGHV1-2P23083 117 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 EDNRAP25101 427 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 CCKARP32238 428 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 NTF4P34130 210 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 SELENOPP49908 381 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 MS4A18Q3C1V0 323 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 FGD3Q5JSP0 725 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 OR7E24Q6IFN5 339 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 HMBOX1Q6NT76 420 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 P2RY8Q86VZ1 359 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 GPR137CQ8N3F9 429 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 PIK3C3Q8NEB9 887 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 ANKK1Q8NFD2 765 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 ACOT11Q8WXI4 607 aaPredicted RBP12.14□□□□□ -0.47
USF1-205ENST00000473969 BPIFA2Q96DR5 249 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 PIP5K1AQ99755 562 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 BTBD10Q9BSF8 475 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 CLEC4MQ9H2X3 399 aaPredicted RBP12.14□□□□□ -0.47
USF1-205ENST00000473969 NMNAT1Q9HAN9 279 aaPredicted RBP12.14□□□□□ -0.47
USF1-205ENST00000473969 B3GAT2Q9NPZ5 323 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 RASSF1Q9NS23 344 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 NDUFAF4Q9P032 175 aa12.14□□□□□ -0.47
USF1-205ENST00000473969 RAD51DO75771 328 aa12.13□□□□□ -0.47
USF1-205ENST00000473969 ASAH2BP0C7U1 165 aa12.13□□□□□ -0.47
USF1-205ENST00000473969 SAGP10523 405 aaPredicted RBP12.13□□□□□ -0.47
USF1-205ENST00000473969 CDH2P19022 906 aaPredicted RBP12.13□□□□□ -0.47
USF1-205ENST00000473969 COX5AP20674 150 aa12.13□□□□□ -0.47
USF1-205ENST00000473969 MPGP29372 298 aa12.13□□□□□ -0.47
USF1-205ENST00000473969 ZP4Q12836 540 aa12.13□□□□□ -0.47
USF1-205ENST00000473969 TAF11Q15544 211 aa12.13□□□□□ -0.47
USF1-205ENST00000473969 BEX5Q5H9J7 111 aa12.13□□□□□ -0.47
USF1-205ENST00000473969 C9orf135Q5VTT2 229 aa12.13□□□□□ -0.47
USF1-205ENST00000473969 KLHL24Q6TFL4 600 aa12.13□□□□□ -0.47
USF1-205ENST00000473969 NRMQ8IXM6 262 aa12.13□□□□□ -0.47
USF1-205ENST00000473969 LRRC17Q8N6Y2 441 aa12.13□□□□□ -0.47
USF1-205ENST00000473969 ZNF433Q8N7K0 673 aaPredicted RBP12.13□□□□□ -0.47
USF1-205ENST00000473969 CCDC124Q96CT7 223 aaKnown RBP12.13□□□□□ -0.47
USF1-205ENST00000473969 ASB9Q96DX5 294 aa12.13□□□□□ -0.47
USF1-205ENST00000473969 PIK3IP1Q96FE7 263 aa12.13□□□□□ -0.47
USF1-205ENST00000473969 ZNF347Q96SE7 839 aa12.13□□□□□ -0.47
USF1-205ENST00000473969 SEPHS2Q99611 448 aa12.13□□□□□ -0.47
USF1-205ENST00000473969 NDEL1Q9GZM8 345 aa12.13□□□□□ -0.47
USF1-205ENST00000473969 B3GAT1Q9P2W7 334 aa12.13□□□□□ -0.47
USF1-205ENST00000473969 TMEM5Q9Y2B1 443 aa12.13□□□□□ -0.47
USF1-205ENST00000473969 A0A1W2PRG6 482 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 A0A1W2PRQ8 180 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 SLC35F4A4IF30 521 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 EFCAB9A8MZ26 197 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 MCIDASD6RGH6 385 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 FFAR1O14842 300 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 TRAF3IP2O43734 574 aaPredicted RBP12.12□□□□□ -0.47
USF1-205ENST00000473969 BCL10O95999 233 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 HPRP00739 348 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 NR1H2P55055 460 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 VLDLRP98155 873 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 SPIBQ01892 262 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 DGCR6Q14129 220 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 PPA1Q15181 289 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 TIMM23BQ5SRD1 257 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 CARD17Q5XLA6 110 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 MBOAT2Q6ZWT7 520 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 SLC35D2Q76EJ3 337 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 SLC46A3Q7Z3Q1 461 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 HDDC2Q7Z4H3 204 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 ZDHHC21Q8IVQ6 265 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 FAM86B1Q8N7N1 296 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 OR6N1Q8NGY5 312 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 C7orf34Q96L11 122 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 LURAP1Q96LR2 239 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 ADAD1Q96M93 576 aaKnown RBP12.12□□□□□ -0.47
USF1-205ENST00000473969 EMC6Q9BV81 110 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 LINC00470Q9BZP3 86 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 IL1RAPQ9NPH3 570 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 C20orf141Q9NUB4 165 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 MED29Q9NX70 200 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 TAS2R5Q9NYW4 299 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 AURKCQ9UQB9 309 aa12.12□□□□□ -0.47
USF1-205ENST00000473969 MPDZO75970 2070 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms