RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 SLC19A3Q9BZV2 496 aa16.64■□□□□ 0.25
PTCD3-210ENST00000473829 RCE1Q9Y256 329 aa16.64■□□□□ 0.25
PTCD3-210ENST00000473829 ENO4A6NNW6 628 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 FFAR1O14842 300 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 PIP5K1CO60331 668 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 IFNW1P05000 195 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 TCN1P20061 433 aaPredicted RBP16.63■□□□□ 0.25
PTCD3-210ENST00000473829 MPGP29372 298 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 LSM11P83369 360 aaKnown RBP eCLIP16.63■□□□□ 0.25
PTCD3-210ENST00000473829 POU3F1Q03052 451 aaPredicted RBP16.63■□□□□ 0.25
PTCD3-210ENST00000473829 PUDPQ08623 228 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 KRT72Q14CN4 511 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 TESK1Q15569 626 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 FXNQ16595 210 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 NCMAPQ5T1S8 102 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 GLYATQ6IB77 296 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 ZNF704Q6ZNC4 412 aaPredicted RBP16.63■□□□□ 0.25
PTCD3-210ENST00000473829 UEVLDQ8IX04 471 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 TMEM123Q8N131 208 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 FAM86B1Q8N7N1 296 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 CCDC197Q8NCU1 140 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 TMEM239Q8WW34 195 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 NINJ1Q92982 152 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 MUS81Q96NY9 551 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 OR2M2Q96R28 347 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 FKRPQ9H9S5 495 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 UBTD1Q9HAC8 227 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 MAN2C1Q9NTJ4 1040 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 C20orf141Q9NUB4 165 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 MED29Q9NX70 200 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 RHCGQ9UBD6 479 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 CD300AQ9UGN4 299 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 SLC25A15Q9Y619 301 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 ROS1P08922 2347 aa16.63■□□□□ 0.25
PTCD3-210ENST00000473829 C11orf98E9PRG8 122 aa16.62■□□□□ 0.25
PTCD3-210ENST00000473829 PRSS23O95084 383 aa16.62■□□□□ 0.25
PTCD3-210ENST00000473829 MT-ND1P03886 318 aa16.62■□□□□ 0.25
PTCD3-210ENST00000473829 RAF1P04049 648 aa16.62■□□□□ 0.25
PTCD3-210ENST00000473829 ASAH2BP0C7U1 165 aa16.62■□□□□ 0.25
PTCD3-210ENST00000473829 THRBP10828 461 aa16.62■□□□□ 0.25
PTCD3-210ENST00000473829 HSD17B1P14061 328 aa16.62■□□□□ 0.25
PTCD3-210ENST00000473829 MSX2P35548 267 aaPredicted RBP16.62■□□□□ 0.25
PTCD3-210ENST00000473829 RBM34P42696 430 aaKnown RBP16.62■□□□□ 0.25
PTCD3-210ENST00000473829 NR1H2P55055 460 aa16.62■□□□□ 0.25
PTCD3-210ENST00000473829 P2RY8Q86VZ1 359 aa16.62■□□□□ 0.25
PTCD3-210ENST00000473829 DEFB107AQ8IZN7 70 aa16.62■□□□□ 0.25
PTCD3-210ENST00000473829 WDR31Q8NA23 367 aa16.62■□□□□ 0.25
PTCD3-210ENST00000473829 TXNDC15Q96J42 360 aa16.62■□□□□ 0.25
PTCD3-210ENST00000473829 CDRT15Q96T59 188 aa16.62■□□□□ 0.25
PTCD3-210ENST00000473829 EMC6Q9BV81 110 aa16.62■□□□□ 0.25
PTCD3-210ENST00000473829 LINC00470Q9BZP3 86 aa16.62■□□□□ 0.25
PTCD3-210ENST00000473829 NANSQ9NR45 359 aa16.62■□□□□ 0.25
PTCD3-210ENST00000473829 TAS2R5Q9NYW4 299 aa16.62■□□□□ 0.25
PTCD3-210ENST00000473829 ALPK2Q86TB3 2170 aa16.61■□□□□ 0.25
PTCD3-210ENST00000473829 DPRXA6NFQ7 191 aa16.61■□□□□ 0.25
PTCD3-210ENST00000473829 ZNF587BE7ETH6 402 aa16.61■□□□□ 0.25
PTCD3-210ENST00000473829 SERPINI2O75830 405 aa16.61■□□□□ 0.25
PTCD3-210ENST00000473829 KRT33AO76009 404 aa16.61■□□□□ 0.25
PTCD3-210ENST00000473829 ADORA3P0DMS8 318 aa16.61■□□□□ 0.25
PTCD3-210ENST00000473829 CDH2P19022 906 aaPredicted RBP16.61■□□□□ 0.25
PTCD3-210ENST00000473829 CD53P19397 219 aa16.61■□□□□ 0.25
PTCD3-210ENST00000473829 AHCYP23526 432 aa16.61■□□□□ 0.25
PTCD3-210ENST00000473829 MXRA7P84157 204 aa16.61■□□□□ 0.25
PTCD3-210ENST00000473829 BSPH1Q075Z2 132 aa16.61■□□□□ 0.25
PTCD3-210ENST00000473829 PHYHD1Q5SRE7 291 aa16.61■□□□□ 0.25
PTCD3-210ENST00000473829 FKBP9P1Q75LS8 142 aa16.61■□□□□ 0.25
PTCD3-210ENST00000473829 OFCC1Q8IZS5 231 aa16.61■□□□□ 0.25
PTCD3-210ENST00000473829 C1orf162Q8NEQ5 155 aaPredicted RBP16.61■□□□□ 0.25
PTCD3-210ENST00000473829 MUCL1Q96DR8 90 aa16.61■□□□□ 0.25
PTCD3-210ENST00000473829 SLC17A5Q9NRA2 495 aa16.61■□□□□ 0.25
PTCD3-210ENST00000473829 DCAF13Q9NV06 445 aaKnown RBP16.61■□□□□ 0.25
PTCD3-210ENST00000473829 ZNF229Q9UJW7 825 aa16.61■□□□□ 0.25
PTCD3-210ENST00000473829 NOX1Q9Y5S8 564 aa16.61■□□□□ 0.25
PTCD3-210ENST00000473829 CADP27708 2225 aa16.61■□□□□ 0.25
PTCD3-210ENST00000473829 SLC43A1O75387 559 aa16.6■□□□□ 0.25
PTCD3-210ENST00000473829 OR7A10O76100 309 aa16.6■□□□□ 0.25
PTCD3-210ENST00000473829 T-ENOLP0DO92 83 aa16.6■□□□□ 0.25
PTCD3-210ENST00000473829 UMPSP11172 480 aa16.6■□□□□ 0.25
PTCD3-210ENST00000473829 DNASE1P24855 282 aa16.6■□□□□ 0.25
PTCD3-210ENST00000473829 ART1P52961 327 aa16.6■□□□□ 0.25
PTCD3-210ENST00000473829 ROR2Q01974 943 aaKnown RBP16.6■□□□□ 0.25
PTCD3-210ENST00000473829 ST3GAL3Q11203 375 aa16.6■□□□□ 0.25
PTCD3-210ENST00000473829 HIKESHIQ53FT3 197 aa16.6■□□□□ 0.25
PTCD3-210ENST00000473829 SAMD4BQ5PRF9 694 aaKnown RBP16.6■□□□□ 0.25
PTCD3-210ENST00000473829 CARD17Q5XLA6 110 aa16.6■□□□□ 0.25
PTCD3-210ENST00000473829 OR7E24Q6IFN5 339 aa16.6■□□□□ 0.25
PTCD3-210ENST00000473829 C16orf89Q6UX73 402 aa16.6■□□□□ 0.25
PTCD3-210ENST00000473829 PXKQ7Z7A4 578 aa16.6■□□□□ 0.25
PTCD3-210ENST00000473829 LURAP1LQ8IV03 231 aa16.6■□□□□ 0.25
PTCD3-210ENST00000473829 C17orf78Q8N4C9 275 aa16.6■□□□□ 0.25
PTCD3-210ENST00000473829 OR1K1Q8NGR3 316 aa16.6■□□□□ 0.25
PTCD3-210ENST00000473829 LILRB1Q8NHL6 650 aaPredicted RBP16.6■□□□□ 0.25
PTCD3-210ENST00000473829 NEUROG1Q92886 237 aa16.6■□□□□ 0.25
PTCD3-210ENST00000473829 ZNF837Q96EG3 531 aaPredicted RBP16.6■□□□□ 0.25
PTCD3-210ENST00000473829 NELFAQ9H3P2 528 aa16.6■□□□□ 0.25
PTCD3-210ENST00000473829 RPS6KA6Q9UK32 745 aa16.6■□□□□ 0.25
PTCD3-210ENST00000473829 SLC35F4A4IF30 521 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 OR6C65A6NJZ3 312 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 ARPC2O15144 300 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 AKAP8O43823 692 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms