RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 MS4A18Q3C1V0 323 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 RUNDC3AQ59EK9 446 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 HIPK1Q86Z02 1210 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 ADPRHL1Q8NDY3 354 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 ZNF417Q8TAU3 575 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 C10orf105Q8TEF2 133 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 STON2Q8WXE9 905 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 FAM168AQ92567 244 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 SLC47A1Q96FL8 570 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 SLC41A3Q96GZ6 507 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 ZNF607Q96SK3 696 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 ZNF587Q96SQ5 575 aaPredicted RBP13.31□□□□□ -0.28
VTI1A-203ENST00000472892 WFDC6Q9BQY6 131 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 RABEP2Q9H5N1 569 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 TMEM27Q9HBJ8 222 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 GPR35Q9HC97 309 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 KLHL14Q9P2G3 628 aa13.31□□□□□ -0.28
VTI1A-203ENST00000472892 TESQ9UGI8 421 aaKnown RBP13.31□□□□□ -0.28
VTI1A-203ENST00000472892 SONP18583 2426 aaKnown RBP13.3□□□□□ -0.28
VTI1A-203ENST00000472892 A0A0B4J2E0 115 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 A0A1B0GX12 115 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 MFN2O95140 757 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 IGKV3-15P01624 115 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 CECR9P0C854 216 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 CBR1P16152 277 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 SERPINF1P36955 418 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 NAAAQ02083 359 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 MFSD13AQ14CX5 517 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 OR1Q1Q15612 314 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 TMEM249Q2WGJ8 235 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 DMRTA1Q5VZB9 504 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 NHLRC1Q6VVB1 395 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 ARMC8Q8IUR7 673 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 HIPK4Q8NE63 616 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 DYDC1Q8WWB3 177 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 NANOS1Q8WY41 292 aaKnown RBP13.3□□□□□ -0.28
VTI1A-203ENST00000472892 PROX1Q92786 737 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 FBXO17Q96EF6 278 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 ZNF837Q96EG3 531 aaPredicted RBP13.3□□□□□ -0.28
VTI1A-203ENST00000472892 OR2M2Q96R28 347 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 CPPED1Q9BRF8 314 aaPredicted RBP13.3□□□□□ -0.28
VTI1A-203ENST00000472892 EVA1AQ9H8M9 152 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 CA10Q9NS85 328 aa13.3□□□□□ -0.28
VTI1A-203ENST00000472892 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.3□□□□□ -0.28
VTI1A-203ENST00000472892 A8MV72 311 aaPredicted RBP13.29□□□□□ -0.28
VTI1A-203ENST00000472892 TRAF3IP2O43734 574 aaPredicted RBP13.29□□□□□ -0.28
VTI1A-203ENST00000472892 HPRP00739 348 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 BGLAPP02818 100 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 CSF3P09919 207 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 CBLP22681 906 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 AQP1P29972 269 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 PCBP3P57721 371 aaKnown RBP13.29□□□□□ -0.28
VTI1A-203ENST00000472892 RGS8P57771 180 aaPredicted RBP13.29□□□□□ -0.28
VTI1A-203ENST00000472892 TUBA1BP68363 451 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 TUBA4AP68366 448 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 VLDLRP98155 873 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 TUBA1AQ71U36 451 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 PTOV1Q86YD1 416 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 CCDC36Q8IYA8 594 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 TMEM123Q8N131 208 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 GPR137CQ8N3F9 429 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 DPP10Q8N608 796 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 SCAIQ8N9R8 606 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 PIK3C3Q8NEB9 887 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 OR4F15Q8NGB8 312 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 CKAP2Q8WWK9 683 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 EPYCQ99645 322 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 KCNS3Q9BQ31 491 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 ZNF385DQ9H6B1 395 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 CRLF2Q9HC73 371 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 INTS9Q9NV88 658 aaKnown RBP13.29□□□□□ -0.28
VTI1A-203ENST00000472892 SELENONQ9NZV5 590 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 LEF1Q9UJU2 399 aaPredicted RBP13.29□□□□□ -0.28
VTI1A-203ENST00000472892 SLC13A4Q9UKG4 626 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 NDUFAF1Q9Y375 327 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 CORINQ9Y5Q5 1042 aa13.29□□□□□ -0.28
VTI1A-203ENST00000472892 FBN1P35555 2871 aaKnown RBP13.29□□□□□ -0.28
VTI1A-203ENST00000472892 CHD3Q12873 2000 aaKnown RBP13.29□□□□□ -0.28
VTI1A-203ENST00000472892 HMGB1P1B2RPK0 211 aaPredicted RBP13.28□□□□□ -0.28
VTI1A-203ENST00000472892 B9A039 149 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 AKAP8O43823 692 aaKnown RBP13.28□□□□□ -0.28
VTI1A-203ENST00000472892 FMO6PO60774 539 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 PDE5AO76074 875 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 LY6HO94772 140 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 HLA-DOBP13765 273 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 CALCRP30988 508 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 CDH12P55289 794 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 NCALDP61601 193 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 SNRPD2P62316 118 aaKnown RBP13.28□□□□□ -0.28
VTI1A-203ENST00000472892 HGFACQ04756 655 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 RBBP4Q09028 425 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 EFNB3Q15768 340 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 ADIPOQQ15848 244 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 CEACAM16Q2WEN9 425 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 PHYHD1Q5SRE7 291 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 SWT1Q5T5J6 900 aaKnown RBP13.28□□□□□ -0.28
VTI1A-203ENST00000472892 LINC00114Q6XXX2 140 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 UEVLDQ8IX04 471 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 C20orf196Q8IYI0 205 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 C11orf65Q8NCR3 313 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms