RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 PRKDCP78527 4128 aaKnown RBP8□□□□□ -1.13
VCL-204ENST00000472585 LOC105371242A0A075B767 164 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 TRAV20A0A0B4J274 112 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 FRS3O43559 492 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 SPAG7O75391 227 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 KRT33AO76009 404 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 TFP02787 698 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 GAAP10253 952 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 ZNF35P13682 527 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 ANPEPP15144 967 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 NR4A1P22736 598 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 CXCR1P25024 350 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 FPR2P25090 351 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 IL12AP29459 219 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 ALDH3B1P43353 468 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 GPR6P46095 362 aaPredicted RBP7.99□□□□□ -1.13
VCL-204ENST00000472585 MAP2K6P52564 334 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 MVDP53602 400 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 UBA52P62987 128 aaKnown RBP7.99□□□□□ -1.13
VCL-204ENST00000472585 MAD2L1BPQ15013 274 aaPredicted RBP7.99□□□□□ -1.13
VCL-204ENST00000472585 GSTA3Q16772 222 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 SPANXN4Q5MJ08 99 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 ATAD3BQ5T9A4 648 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 C1orf140Q5VVS0 124 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 RBMS3Q6XE24 437 aaKnown RBP7.99□□□□□ -1.13
VCL-204ENST00000472585 ZNF836Q6ZNA1 936 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 LRRC74BQ6ZQY2 392 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 CMIPQ8IY22 773 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 IFT20Q8IY31 132 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 ZDHHC22Q8N966 263 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 TCP10LQ8TDR4 215 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 ANKRD27Q96NW4 1050 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 RHOXF2Q9BQY4 288 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 SLC35A5Q9BS91 424 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 MTHFD2LQ9H903 347 aaPredicted RBP7.99□□□□□ -1.13
VCL-204ENST00000472585 UNKLQ9H9P5 680 aaKnown RBP7.99□□□□□ -1.13
VCL-204ENST00000472585 NTN4Q9HB63 628 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 G6PC2Q9NQR9 355 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 SLC6A13Q9NSD5 602 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 MKS1Q9NXB0 559 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 ZNF224Q9NZL3 707 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 REV1Q9UBZ9 1251 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 MARCOQ9UEW3 520 aaPredicted RBP7.99□□□□□ -1.13
VCL-204ENST00000472585 PPIAL4AQ9Y536 164 aa7.99□□□□□ -1.13
VCL-204ENST00000472585 CDHR4A6H8M9 788 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 A8MVM7 634 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 RP2O75695 350 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 AGR2O95994 175 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 HPRP00739 348 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 HLA-HP01893 362 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 GSNP06396 782 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 TFPTP0C1Z6 253 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 VSIG8P0DPA2 414 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 SAGP10523 405 aaPredicted RBP7.98□□□□□ -1.13
VCL-204ENST00000472585 PNMTP11086 282 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 PAX7P23759 505 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 AQP5P55064 265 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 CLDN17P56750 224 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 HOXC5Q00444 222 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 POU3F1Q03052 451 aaPredicted RBP7.98□□□□□ -1.13
VCL-204ENST00000472585 NPRL3Q12980 569 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 SNTB2Q13425 540 aaKnown RBP7.98□□□□□ -1.13
VCL-204ENST00000472585 DAG1Q14118 895 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 CEACAM16Q2WEN9 425 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 LCE2CQ5TA81 110 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 PRAMEF8Q5VWM4 474 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 PRAMEF7Q5VXH5 474 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 ABHD12BQ7Z5M8 362 aaPredicted RBP7.98□□□□□ -1.13
VCL-204ENST00000472585 TMEM123Q8N131 208 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 CADM2Q8N3J6 435 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 MNS1Q8NEH6 495 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 KIF18AQ8NI77 898 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 FGFBP3Q8TAT2 258 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 NANPQ8TBE9 248 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 PNPT1Q8TCS8 783 aaKnown RBP7.98□□□□□ -1.13
VCL-204ENST00000472585 TESCQ96BS2 214 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 KTI12Q96EK9 354 aaPredicted RBP7.98□□□□□ -1.13
VCL-204ENST00000472585 APOPT1Q96IL0 206 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 CCDC115Q96NT0 180 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 ZNF317Q96PQ6 595 aaPredicted RBP7.98□□□□□ -1.13
VCL-204ENST00000472585 SYT3Q9BQG1 590 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 C1QTNF5Q9BXJ0 243 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 TMPRSS13Q9BYE2 586 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 CRLF2Q9HC73 371 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 SLC52A3Q9NQ40 469 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 ZNF275Q9NSD4 429 aaPredicted RBP7.98□□□□□ -1.13
VCL-204ENST00000472585 NOP53Q9NZM5 478 aaKnown RBP7.98□□□□□ -1.13
VCL-204ENST00000472585 FZR1Q9UM11 496 aa7.98□□□□□ -1.13
VCL-204ENST00000472585 CCDC154A6NI56 674 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 MS4A18H0YCH9 400 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 SYNGR3O43761 229 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 FZD7O75084 574 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 DEAF1O75398 565 aaPredicted RBP7.97□□□□□ -1.13
VCL-204ENST00000472585 VAMP5O95183 116 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 BPGMP07738 259 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 NAT2P11245 290 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 HLA-DOBP13765 273 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 IL7RP16871 459 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 ZNF14P17017 642 aaPredicted RBP7.97□□□□□ -1.13
VCL-204ENST00000472585 ADRA2CP18825 462 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms