RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 SLC35A1P78382 337 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 TRAP1Q12931 704 aaKnown RBP8.11□□□□□ -1.11
SMC4-213ENST00000472282 FLOT2Q14254 428 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 GUSBP1Q15486 140 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 OR7A5Q15622 319 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 C5orf46Q6UWT4 87 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 TSEN54Q7Z6J9 526 aaKnown RBP8.11□□□□□ -1.11
SMC4-213ENST00000472282 TGIF2LYQ8IUE0 185 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 NKAIN4Q8IVV8 208 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 OFCC1Q8IZS5 231 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 CNEP1R1Q8N9A8 125 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 RNF128Q8TEB7 428 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 ABHD3Q8WU67 409 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 ZHX1-C8orf76Q96EF9 292 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 KTI12Q96EK9 354 aaPredicted RBP8.11□□□□□ -1.11
SMC4-213ENST00000472282 MPP4Q96JB8 637 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 C7orf34Q96L11 122 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 LRGUKQ96M69 825 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 SEPHS2Q99611 448 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 TMEM43Q9BTV4 400 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 PTDSS2Q9BVG9 487 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 FNDC11Q9BVV2 318 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 TAPBPLQ9BX59 468 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 TRIM15Q9C019 465 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 PIGMQ9H3S5 423 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 RNF122Q9H9V4 155 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 C6orf203Q9P0P8 240 aaPredicted RBP8.11□□□□□ -1.11
SMC4-213ENST00000472282 RHCGQ9UBD6 479 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 SLC7A8Q9UHI5 535 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 RIMS3Q9UJD0 308 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 CLEC4AQ9UMR7 237 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 POMPQ9Y244 141 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 TESMINQ9Y4I5 508 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 ZNF469Q96JG9 3925 aaPredicted RBP8.11□□□□□ -1.11
SMC4-213ENST00000472282 ALPK2Q86TB3 2170 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 TRAV36DV7A0A075B6V5 113 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 MEGF11A6BM72 1044 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 ZNF814B7Z6K7 855 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 FTCDNL1E5RQL4 147 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 KPNA4O00629 521 aaPredicted RBP8.1□□□□□ -1.11
SMC4-213ENST00000472282 FFAR1O14842 300 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 DNPH1O43598 174 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 PIP5K1CO60331 668 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 RAMP1O60894 148 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 PRSS23O95084 383 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 AKR7A3O95154 331 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 PLGP00747 810 aaPredicted RBP8.1□□□□□ -1.11
SMC4-213ENST00000472282 BGLAPP02818 100 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 MT-ND1P03886 318 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 RAF1P04049 648 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 FABP3P05413 133 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 THRBP10828 461 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 CD99P14209 185 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 FPR1P21462 350 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 FUT4P22083 530 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 CBLP22681 906 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 DNASE1P24855 282 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 GTF2E2P29084 291 aaKnown RBP8.1□□□□□ -1.11
SMC4-213ENST00000472282 IFNA8P32881 189 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 ERFP50548 548 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 UGT2B15P54855 530 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 ADAM8P78325 824 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 RASGEF1BQ0VAM2 473 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 ST3GAL3Q11203 375 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 FAM69AQ5T7M9 428 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 FBXW10Q5XX13 1052 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 ABLIM2Q6H8Q1 611 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 OR2A2Q6IF42 318 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 TTC33Q6PID6 262 aaPredicted RBP8.1□□□□□ -1.11
SMC4-213ENST00000472282 ASRGL1Q7L266 308 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 CYP4Z1Q86W10 505 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 ZDHHC21Q8IVQ6 265 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 ZNF610Q8N9Z0 462 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 MFSD8Q8NHS3 518 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 TMEM255BQ8WV15 326 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 TAAR8Q969N4 342 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 SLC25A36Q96CQ1 311 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 DACH2Q96NX9 599 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 WFIKKN1Q96NZ8 548 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 ZNF300Q96RE9 604 aaPredicted RBP8.1□□□□□ -1.11
SMC4-213ENST00000472282 EPYCQ99645 322 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 ZNF426Q9BUY5 554 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 GSX1Q9H4S2 264 aaPredicted RBP8.1□□□□□ -1.11
SMC4-213ENST00000472282 MAN2C1Q9NTJ4 1040 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 NDUFAF4Q9P032 175 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 KLHL13Q9P2N7 655 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 TRAPPC4Q9Y296 219 aa8.1□□□□□ -1.11
SMC4-213ENST00000472282 FAM32AQ9Y421 112 aaKnown RBP8.1□□□□□ -1.11
SMC4-213ENST00000472282 AQP7P3A6NL99 342 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 AQP12BA6NM10 295 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 DEFB108AA8MXU0 73 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 LRRN3E7EW58 273 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 OR2T1O43869 369 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 EIF4EBP3O60516 100 aaPredicted RBP8.09□□□□□ -1.11
SMC4-213ENST00000472282 EIF1BO60739 113 aaKnown RBP8.09□□□□□ -1.11
SMC4-213ENST00000472282 CYTIPO60759 359 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 SS18L1O75177 396 aaPredicted RBP8.09□□□□□ -1.11
SMC4-213ENST00000472282 CRHP06850 196 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 H1F0P07305 194 aaKnown RBP8.09□□□□□ -1.11
SMC4-213ENST00000472282 ITGA2P17301 1181 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms