RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ADI1Q9BV57 179 aa17.12■□□□□ 0.33
PSPC1-203ENST00000471658 PAQR5Q9NXK6 330 aaPredicted RBP17.12■□□□□ 0.33
PSPC1-203ENST00000471658 KIAA1549Q9HCM3 1950 aa17.12■□□□□ 0.33
PSPC1-203ENST00000471658 LOC100130705A0A1B0GUX0 176 aa17.11■□□□□ 0.33
PSPC1-203ENST00000471658 M0R129 80 aa17.11■□□□□ 0.33
PSPC1-203ENST00000471658 TOP3AQ13472 1001 aaPredicted RBP17.11■□□□□ 0.33
PSPC1-203ENST00000471658 SLC17A1Q14916 467 aa17.11■□□□□ 0.33
PSPC1-203ENST00000471658 RPL13AP3Q6NVV1 102 aa17.11■□□□□ 0.33
PSPC1-203ENST00000471658 C3P1Q6ZMU1 363 aa17.11■□□□□ 0.33
PSPC1-203ENST00000471658 DPY19L2P2Q6ZN68 376 aa17.11■□□□□ 0.33
PSPC1-203ENST00000471658 OR52L1Q8NGH7 329 aa17.11■□□□□ 0.33
PSPC1-203ENST00000471658 FAM57AQ8TBR7 257 aa17.11■□□□□ 0.33
PSPC1-203ENST00000471658 OXGR1Q96P68 337 aa17.11■□□□□ 0.33
PSPC1-203ENST00000471658 PRRG4Q9BZD6 226 aa17.11■□□□□ 0.33
PSPC1-203ENST00000471658 NRIP3Q9NQ35 241 aa17.11■□□□□ 0.33
PSPC1-203ENST00000471658 ING1Q9UK53 422 aaPredicted RBP17.11■□□□□ 0.33
PSPC1-203ENST00000471658 ZNF346Q9UL40 294 aaKnown RBP17.11■□□□□ 0.33
PSPC1-203ENST00000471658 MCTS1Q9ULC4 181 aaKnown RBP17.11■□□□□ 0.33
PSPC1-203ENST00000471658 CLEC4AQ9UMR7 237 aa17.11■□□□□ 0.33
PSPC1-203ENST00000471658 RASD1Q9Y272 281 aa17.11■□□□□ 0.33
PSPC1-203ENST00000471658 A0A1W2PNV4 684 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 AHRRA9YTQ3 701 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 CYTIPO60759 359 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 PRB1P04280 392 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 CD14P08571 375 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 POU3F1Q03052 451 aaPredicted RBP17.1■□□□□ 0.33
PSPC1-203ENST00000471658 MELKQ14680 651 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 PGGHGQ32M88 737 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 ACSF3Q4G176 576 aaPredicted RBP17.1■□□□□ 0.33
PSPC1-203ENST00000471658 ABLIM2Q6H8Q1 611 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 SLC27A4Q6P1M0 643 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 RPTNQ6XPR3 784 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 CCDC71Q8IV32 467 aaPredicted RBP17.1■□□□□ 0.33
PSPC1-203ENST00000471658 OR2T33Q8NG76 320 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 TFAP2CQ92754 450 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 UBE2FQ969M7 185 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 Q96M85 177 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 ERMAPQ96PL5 475 aaPredicted RBP17.1■□□□□ 0.33
PSPC1-203ENST00000471658 TSPAN32Q96QS1 320 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 GPX7Q96SL4 187 aaPredicted RBP17.1■□□□□ 0.33
PSPC1-203ENST00000471658 ZNF184Q99676 751 aaPredicted RBP17.1■□□□□ 0.33
PSPC1-203ENST00000471658 POLDIP3Q9BY77 421 aaKnown RBP17.1■□□□□ 0.33
PSPC1-203ENST00000471658 SLC25A19Q9HC21 320 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 FANCFQ9NPI8 374 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 MED29Q9NX70 200 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 CLCF1Q9UBD9 225 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 ENOPH1Q9UHY7 261 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 ZNF835Q9Y2P0 537 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 GTF3C1Q12789 2109 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 SLC22A20A6NK97 555 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 ZNF716A6NP11 495 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 SLC16A6O15403 523 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 SLC2A10O95528 541 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 GNAO1P09471 354 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 IFNGR1P15260 489 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 CAPGP40121 348 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 RASGEF1BQ0VAM2 473 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 DBPQ10586 325 aaPredicted RBP17.1■□□□□ 0.33
PSPC1-203ENST00000471658 ACKR1Q16570 336 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 SLX4IPQ5VYV7 408 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 RTL6Q6ICC9 239 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 FAM122BQ7Z309 247 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 PXKQ7Z7A4 578 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 UEVLDQ8IX04 471 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 RPRMLQ8N4K4 120 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 ZIC4Q8N9L1 334 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 ZNF555Q8NEP9 628 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 OR9K2Q8NGE7 335 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 RNF128Q8TEB7 428 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 RASD2Q96D21 266 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 HRASLS5Q96KN8 279 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 EMC6Q9BV81 110 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 TVP23BQ9NYZ1 205 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 NDRG4Q9ULP0 352 aaKnown RBP17.1■□□□□ 0.33
PSPC1-203ENST00000471658 GMPPBQ9Y5P6 360 aa17.1■□□□□ 0.33
PSPC1-203ENST00000471658 LOC102725191A0A1B0GVB3 256 aa17.09■□□□□ 0.33
PSPC1-203ENST00000471658 TRAF3IP2O43734 574 aaPredicted RBP17.09■□□□□ 0.33
PSPC1-203ENST00000471658 SLC19A2O60779 497 aa17.09■□□□□ 0.33
PSPC1-203ENST00000471658 ZNF43P17038 809 aa17.09■□□□□ 0.33
PSPC1-203ENST00000471658 SMSP52788 366 aa17.09■□□□□ 0.33
PSPC1-203ENST00000471658 MYBPC1Q00872 1141 aa17.09■□□□□ 0.33
PSPC1-203ENST00000471658 C1DQ13901 141 aaKnown RBP17.09■□□□□ 0.33
PSPC1-203ENST00000471658 TAF11Q15544 211 aa17.09■□□□□ 0.33
PSPC1-203ENST00000471658 EEF1A1P5Q5VTE0 462 aa17.09■□□□□ 0.33
PSPC1-203ENST00000471658 C12orf73Q69YU5 71 aa17.09■□□□□ 0.33
PSPC1-203ENST00000471658 CREB3L2Q70SY1 520 aa17.09■□□□□ 0.33
PSPC1-203ENST00000471658 SLC35D2Q76EJ3 337 aa17.09■□□□□ 0.33
PSPC1-203ENST00000471658 DOLPP1Q86YN1 238 aa17.09■□□□□ 0.33
PSPC1-203ENST00000471658 LNX2Q8N448 690 aa17.09■□□□□ 0.33
PSPC1-203ENST00000471658 LSM14AQ8ND56 463 aaKnown RBP17.09■□□□□ 0.33
PSPC1-203ENST00000471658 ANKK1Q8NFD2 765 aa17.09■□□□□ 0.33
PSPC1-203ENST00000471658 ZNF385AQ96PM9 386 aaKnown RBP17.09■□□□□ 0.33
PSPC1-203ENST00000471658 AASSQ9UDR5 926 aa17.09■□□□□ 0.33
PSPC1-203ENST00000471658 TINAGQ9UJW2 476 aa17.09■□□□□ 0.33
PSPC1-203ENST00000471658 FAM215AQ9Y5M1 114 aa17.09■□□□□ 0.33
PSPC1-203ENST00000471658 NOX1Q9Y5S8 564 aa17.09■□□□□ 0.33
PSPC1-203ENST00000471658 SHANK1Q9Y566 2161 aa17.08■□□□□ 0.33
PSPC1-203ENST00000471658 TEX13CA0A0J9YWL9 993 aa17.08■□□□□ 0.32
PSPC1-203ENST00000471658 IMPA2O14732 288 aa17.08■□□□□ 0.32
PSPC1-203ENST00000471658 VAMP5O95183 116 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms