RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 MS4A18Q3C1V0 323 aa13.07□□□□□ -0.32
VPS8-221ENST00000471655 HMBOX1Q6NT76 420 aa13.07□□□□□ -0.32
VPS8-221ENST00000471655 NHLRC1Q6VVB1 395 aa13.07□□□□□ -0.32
VPS8-221ENST00000471655 ALKBH3Q96Q83 286 aaPredicted RBP13.07□□□□□ -0.32
VPS8-221ENST00000471655 MCHR1Q99705 422 aa13.07□□□□□ -0.32
VPS8-221ENST00000471655 CACNG6Q9BXT2 260 aa13.07□□□□□ -0.32
VPS8-221ENST00000471655 GDF2Q9UK05 429 aaPredicted RBP13.07□□□□□ -0.32
VPS8-221ENST00000471655 ATP23Q9Y6H3 246 aa13.07□□□□□ -0.32
VPS8-221ENST00000471655 ZANQ9Y493 2812 aa13.07□□□□□ -0.32
VPS8-221ENST00000471655 IGHV1-18A0A0C4DH31 117 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 RNF223E7ERA6 249 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 FBP2O00757 339 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 TRAF3IP2O43734 574 aaPredicted RBP13.06□□□□□ -0.32
VPS8-221ENST00000471655 MT-ATP6P00846 226 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 NPPAP01160 153 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 BMP4P12644 408 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 PCGF2P35227 344 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 GZMMP51124 257 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 DSCR9P59020 149 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 UBE2NP61088 152 aaKnown RBP13.06□□□□□ -0.32
VPS8-221ENST00000471655 CYLC2Q14093 348 aaPredicted RBP13.06□□□□□ -0.32
VPS8-221ENST00000471655 COQ5Q5HYK3 327 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 INTS11Q5TA45 600 aaKnown RBP13.06□□□□□ -0.32
VPS8-221ENST00000471655 CCDC80Q76M96 950 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 CCDC36Q8IYA8 594 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 TMEM123Q8N131 208 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 GPR137CQ8N3F9 429 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 SMYD1Q8NB12 490 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 PIK3C3Q8NEB9 887 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 GPR32P1Q8NGA4 272 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 RASSF5Q8WWW0 418 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 LRR1Q96L50 414 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 SLC38A2Q96QD8 506 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 OR2M2Q96R28 347 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 SH3GL1Q99961 368 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 KATNB1Q9BVA0 655 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 TMEM120AQ9BXJ8 343 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 ASPNQ9BXN1 380 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 NELFAQ9H3P2 528 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 GPR35Q9HC97 309 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 MRPL39Q9NYK5 338 aaKnown RBP13.06□□□□□ -0.32
VPS8-221ENST00000471655 NOX1Q9Y5S8 564 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 PLCE1Q9P212 2302 aa13.06□□□□□ -0.32
VPS8-221ENST00000471655 FN1P02751 2386 aaKnown RBP13.05□□□□□ -0.32
VPS8-221ENST00000471655 CHP2O43745 196 aa13.05□□□□□ -0.32
VPS8-221ENST00000471655 IGLV1-44P01699 117 aa13.05□□□□□ -0.32
VPS8-221ENST00000471655 TROVE2P10155 538 aaKnown RBP eCLIP13.05□□□□□ -0.32
VPS8-221ENST00000471655 PTNP21246 168 aa13.05□□□□□ -0.32
VPS8-221ENST00000471655 CHRNB3Q05901 458 aa13.05□□□□□ -0.32
VPS8-221ENST00000471655 KRTAP1-1Q07627 177 aa13.05□□□□□ -0.32
VPS8-221ENST00000471655 RAB35Q15286 201 aa13.05□□□□□ -0.32
VPS8-221ENST00000471655 VMACQ2NL98 169 aa13.05□□□□□ -0.32
VPS8-221ENST00000471655 TRMT5Q32P41 509 aaKnown RBP13.05□□□□□ -0.32
VPS8-221ENST00000471655 NANOGP8Q6NSW7 305 aa13.05□□□□□ -0.32
VPS8-221ENST00000471655 UEVLDQ8IX04 471 aa13.05□□□□□ -0.32
VPS8-221ENST00000471655 OR10H5Q8NGA6 315 aa13.05□□□□□ -0.32
VPS8-221ENST00000471655 OR6T1Q8NGN1 323 aa13.05□□□□□ -0.32
VPS8-221ENST00000471655 OR10A6Q8NH74 314 aa13.05□□□□□ -0.32
VPS8-221ENST00000471655 RNF217Q8TC41 542 aa13.05□□□□□ -0.32
VPS8-221ENST00000471655 PCDHAC1Q9H158 963 aa13.05□□□□□ -0.32
VPS8-221ENST00000471655 HEATR1Q9H583 2144 aaKnown RBP13.05□□□□□ -0.32
VPS8-221ENST00000471655 NANOGQ9H9S0 305 aa13.05□□□□□ -0.32
VPS8-221ENST00000471655 MOKQ9UQ07 419 aa13.05□□□□□ -0.32
VPS8-221ENST00000471655 NAV3Q8IVL0 2385 aa13.05□□□□□ -0.32
VPS8-221ENST00000471655 ATP6V1G2-DDX39BF2Z307 99 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 M0R3H8 397 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 PLPP3O14495 311 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 SSX4O60224 188 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 HPRP00739 348 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 IGKV3-15P01624 115 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 CRYAAP02489 173 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 NQO1P15559 274 aaKnown RBP13.04□□□□□ -0.32
VPS8-221ENST00000471655 CBR1P16152 277 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 CD247P20963 164 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 CBLP22681 906 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 ARF1P84077 181 aaKnown RBP13.04□□□□□ -0.32
VPS8-221ENST00000471655 PUDPQ08623 228 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 PMS2P3Q13401 168 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 NPTX1Q15818 432 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 SWI5Q1ZZU3 235 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 ENTPD8Q5MY95 495 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 ZNF627Q7L945 461 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 PXKQ7Z7A4 578 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 C20orf196Q8IYI0 205 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 OR8J3Q8NGG0 315 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 TAMM41Q96BW9 452 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 LRRC58Q96CX6 371 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 MPP4Q96JB8 637 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 MOGAT1Q96PD6 335 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 RHNO1Q9BSD3 238 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 SLC19A3Q9BZV2 496 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 CRLF2Q9HC73 371 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 PMF1-BGLAPU3KQ54 211 aa13.04□□□□□ -0.32
VPS8-221ENST00000471655 A0A096LPE4 126 aa13.03□□□□□ -0.32
VPS8-221ENST00000471655 A0A1W2PPZ6 126 aa13.03□□□□□ -0.32
VPS8-221ENST00000471655 TRAPPC13A5PLN9 417 aa13.03□□□□□ -0.32
VPS8-221ENST00000471655 BBIP1A8MTZ0 92 aa13.03□□□□□ -0.32
VPS8-221ENST00000471655 ZNF99A8MXY4 864 aaPredicted RBP13.03□□□□□ -0.32
VPS8-221ENST00000471655 FXYD1O00168 92 aa13.03□□□□□ -0.32
VPS8-221ENST00000471655 PDE5AO76074 875 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms