RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 DHDDSQ86SQ9 333 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 ZNF100Q8IYN0 542 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 FBXL14Q8N1E6 418 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 UBE2J2Q8N2K1 259 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 SLC43A2Q8N370 569 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 BBS10Q8TAM1 723 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 PIGXQ8TBF5 258 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 POC1BQ8TC44 478 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 RNF128Q8TEB7 428 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 GATAD1Q8WUU5 269 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 CKAP2Q8WWK9 683 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 C22orf15Q8WYQ4 148 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 KISS1RQ969F8 398 aaPredicted RBP5.09□□□□□ -1.59
VARS-222ENST00000470953 DNAJA3Q96EY1 480 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 TMEM19Q96HH6 336 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 C1orf147Q96MC9 270 aaPredicted RBP5.09□□□□□ -1.59
VARS-222ENST00000470953 NPAS1Q99742 590 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 SPATA5L1Q9BVQ7 753 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 TAPBPLQ9BX59 468 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 SRXN1Q9BYN0 137 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 KRTAP4-5Q9BYR2 181 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 MTHFD2LQ9H903 347 aaPredicted RBP5.09□□□□□ -1.59
VARS-222ENST00000470953 LPAR2Q9HBW0 351 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 EXOSC3Q9NQT5 275 aaKnown RBP5.09□□□□□ -1.59
VARS-222ENST00000470953 MRGBPQ9NV56 204 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 NECAP2Q9NVZ3 263 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 LEF1Q9UJU2 399 aaPredicted RBP5.09□□□□□ -1.59
VARS-222ENST00000470953 ZNF443Q9Y2A4 671 aaPredicted RBP5.09□□□□□ -1.59
VARS-222ENST00000470953 IFT52Q9Y366 437 aa5.09□□□□□ -1.59
VARS-222ENST00000470953 PLECQ15149 4684 aaKnown RBP5.08□□□□□ -1.6
VARS-222ENST00000470953 TMED7-TICAM2A0A0A6YYA0 188 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 AP3D1O14617 1153 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 EDF1O60869 148 aaKnown RBP5.08□□□□□ -1.6
VARS-222ENST00000470953 KRT33AO76009 404 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 AHSA1O95433 338 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 STAMBPO95630 424 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 ADAP00813 363 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 GUSBP08236 651 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 OMGP23515 440 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 SLC6A2P23975 617 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 PSMA4P25789 261 aaKnown RBP5.08□□□□□ -1.6
VARS-222ENST00000470953 FKBP2P26885 142 aaKnown RBP5.08□□□□□ -1.6
VARS-222ENST00000470953 TACR3P29371 465 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 AQP1P29972 269 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 DIO1P49895 249 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 ATP4BP51164 291 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 RAC3P60763 192 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 SLC35A1P78382 337 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 SF3A3Q12874 501 aaKnown RBP eCLIP5.08□□□□□ -1.6
VARS-222ENST00000470953 RGNQ15493 299 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 MAPRE2Q15555 327 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 STK11Q15831 433 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 KLHL22Q53GT1 634 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 ZNF311Q5JNZ3 666 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 SHQ1Q6PI26 577 aaKnown RBP5.08□□□□□ -1.6
VARS-222ENST00000470953 SLC22A25Q6T423 547 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 KLHL24Q6TFL4 600 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 CASP12Q6UXS9 341 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 C17orf107Q6ZR85 190 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 NUFIP2Q7Z417 695 aaKnown RBP5.08□□□□□ -1.6
VARS-222ENST00000470953 SPATA21Q7Z572 469 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 KRT77Q7Z794 578 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 GALNT5Q7Z7M9 940 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 VRK2Q86Y07 508 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 TUSC5Q8IXB3 177 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 FAM71CQ8NEG0 241 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 NFKBIDQ8NI38 313 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 SLC26A7Q8TE54 656 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 SLC38A5Q8WUX1 472 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 GIMAP1Q8WWP7 306 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 CNOT9Q92600 299 aaKnown RBP5.08□□□□□ -1.6
VARS-222ENST00000470953 PMM1Q92871 262 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 HPS1Q92902 700 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 MAL2Q969L2 176 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 APH1AQ96BI3 265 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 ADGRG7Q96K78 797 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 ZNF607Q96SK3 696 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 KLHDC3Q9BQ90 382 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 NAA11Q9BSU3 229 aaPredicted RBP5.08□□□□□ -1.6
VARS-222ENST00000470953 TMEM120AQ9BXJ8 343 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 OR11A1Q9GZK7 315 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 SAP130Q9H0E3 1048 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 SLC38A1Q9H2H9 487 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 COQ10BQ9H8M1 238 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 A4GALTQ9NPC4 353 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 NGBQ9NPG2 151 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 BATF3Q9NR55 127 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 CTPS2Q9NRF8 586 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 ACER3Q9NUN7 267 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 FGFR1OP2Q9NVK5 253 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 HIF1ANQ9NWT6 349 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 KCNE5Q9UJ90 142 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 NDUFAF1Q9Y375 327 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 TMED7Q9Y3B3 224 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 HDGFL3Q9Y3E1 203 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 PCDHB14Q9Y5E9 798 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 ALMS1Q8TCU4 4167 aa5.08□□□□□ -1.6
VARS-222ENST00000470953 A0A0G2JPF8 293 aa5.07□□□□□ -1.6
VARS-222ENST00000470953 CIB4A0PJX0 185 aa5.07□□□□□ -1.6
VARS-222ENST00000470953 TMEM72A0PK05 275 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms