RNA–Protein interactions for RNA: ENST00000469608.5

CALCA-204, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-204ENST00000469608 CARD17Q5XLA6 110 aa12.36□□□□□ -0.43
CALCA-204ENST00000469608 FAM91A1Q658Y4 838 aa12.36□□□□□ -0.43
CALCA-204ENST00000469608 ANKRD16Q6P6B7 361 aa12.36□□□□□ -0.43
CALCA-204ENST00000469608 H1FNTQ75WM6 255 aaPredicted RBP12.36□□□□□ -0.43
CALCA-204ENST00000469608 RETREG3Q86VR2 466 aa12.36□□□□□ -0.43
CALCA-204ENST00000469608 PTOV1Q86YD1 416 aa12.36□□□□□ -0.43
CALCA-204ENST00000469608 UEVLDQ8IX04 471 aa12.36□□□□□ -0.43
CALCA-204ENST00000469608 C11orf65Q8NCR3 313 aa12.36□□□□□ -0.43
CALCA-204ENST00000469608 BHLHE22Q8NFJ8 381 aaPredicted RBP12.36□□□□□ -0.43
CALCA-204ENST00000469608 OR2M2Q96R28 347 aa12.36□□□□□ -0.43
CALCA-204ENST00000469608 EPYCQ99645 322 aa12.36□□□□□ -0.43
CALCA-204ENST00000469608 CGREF1Q99674 301 aa12.36□□□□□ -0.43
CALCA-204ENST00000469608 NELFAQ9H3P2 528 aa12.36□□□□□ -0.43
CALCA-204ENST00000469608 ZNF385DQ9H6B1 395 aa12.36□□□□□ -0.43
CALCA-204ENST00000469608 SEC61A2Q9H9S3 476 aa12.36□□□□□ -0.43
CALCA-204ENST00000469608 ARGLU1Q9NWB6 273 aaPredicted RBP12.36□□□□□ -0.43
CALCA-204ENST00000469608 TRIM33Q9UPN9 1127 aa12.36□□□□□ -0.43
CALCA-204ENST00000469608 NDUFAF1Q9Y375 327 aa12.36□□□□□ -0.43
CALCA-204ENST00000469608 A0A087WUJ7 227 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 ARPC4-TTLL3A0A0A6YYG9 625 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 TRAF3IP2O43734 574 aaPredicted RBP12.35□□□□□ -0.43
CALCA-204ENST00000469608 AKAP8O43823 692 aaKnown RBP12.35□□□□□ -0.43
CALCA-204ENST00000469608 TPST2O60704 377 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 EDF1O60869 148 aaKnown RBP12.35□□□□□ -0.43
CALCA-204ENST00000469608 SERPINI2O75830 405 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 ZNF432O94892 652 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 MFN2O95140 757 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 HPRP00739 348 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 CRYAAP02489 173 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 CECR9P0C854 216 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 BMP4P12644 408 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 HLA-DOBP13765 273 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 CDH12P55289 794 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 PCBP3P57721 371 aaKnown RBP12.35□□□□□ -0.43
CALCA-204ENST00000469608 POU3F1Q03052 451 aaPredicted RBP12.35□□□□□ -0.43
CALCA-204ENST00000469608 CEACAM16Q2WEN9 425 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 VHLLQ6RSH7 139 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 VANGL1Q8TAA9 524 aaPredicted RBP12.35□□□□□ -0.43
CALCA-204ENST00000469608 STON2Q8WXE9 905 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 ZNF837Q96EG3 531 aaPredicted RBP12.35□□□□□ -0.43
CALCA-204ENST00000469608 BOD1Q96IK1 185 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 ANKRD27Q96NW4 1050 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 MOGAT1Q96PD6 335 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 KATNB1Q9BVA0 655 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 ASPNQ9BXN1 380 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 VIPAS39Q9H9C1 493 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 CRLF2Q9HC73 371 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 GPR35Q9HC97 309 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 YAE1D1Q9NRH1 226 aa12.35□□□□□ -0.43
CALCA-204ENST00000469608 YLPM1P49750 1951 aaKnown RBP12.35□□□□□ -0.43
CALCA-204ENST00000469608 CPSF4LA6NMK7 179 aaKnown RBP12.34□□□□□ -0.43
CALCA-204ENST00000469608 LRRN3E7EW58 273 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 M0R3G1 203 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 CD5LO43866 347 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 BGLAPP02818 100 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 CELA3BP08861 270 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 CAPZA2P47755 286 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 IDH3GP51553 393 aaPredicted RBP12.34□□□□□ -0.43
CALCA-204ENST00000469608 DSCR9P59020 149 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 SNRPD2P62316 118 aaKnown RBP12.34□□□□□ -0.43
CALCA-204ENST00000469608 NAAAQ02083 359 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 RBBP4Q09028 425 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 NPRL3Q12980 569 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 PMS2P3Q13401 168 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 MFSD13AQ14CX5 517 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 NET1Q7Z628 596 aaPredicted RBP12.34□□□□□ -0.43
CALCA-204ENST00000469608 MYPOPQ86VE0 399 aaPredicted RBP12.34□□□□□ -0.43
CALCA-204ENST00000469608 TMEM123Q8N131 208 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 DPP10Q8N608 796 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 ADPRHL1Q8NDY3 354 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 PIK3C3Q8NEB9 887 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 GPR32P1Q8NGA4 272 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 MAGEE2Q8TD90 523 aaPredicted RBP12.34□□□□□ -0.43
CALCA-204ENST00000469608 FAM168AQ92567 244 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 ZNF317Q96PQ6 595 aaPredicted RBP12.34□□□□□ -0.43
CALCA-204ENST00000469608 MCHR1Q99705 422 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 ARHGDIGQ99819 225 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 EMC6Q9BV81 110 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 CA10Q9NS85 328 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 MED29Q9NX70 200 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 ADAM21Q9UKJ8 722 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 CORINQ9Y5Q5 1042 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 PMF1-BGLAPU3KQ54 211 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 COL6A5A8TX70 2615 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 DNHD1Q96M86 4753 aa12.34□□□□□ -0.43
CALCA-204ENST00000469608 ZNF503-AS2A6NEH8 195 aa12.33□□□□□ -0.44
CALCA-204ENST00000469608 MS4A18H0YCH9 400 aa12.33□□□□□ -0.44
CALCA-204ENST00000469608 RPL36A-HNRNPH2H7BZ11 118 aa12.33□□□□□ -0.44
CALCA-204ENST00000469608 GPRIN2O60269 458 aa12.33□□□□□ -0.44
CALCA-204ENST00000469608 CRLF1O75462 422 aa12.33□□□□□ -0.44
CALCA-204ENST00000469608 H2AFXP16104 143 aaPredicted RBP12.33□□□□□ -0.44
CALCA-204ENST00000469608 CALCRP30988 508 aa12.33□□□□□ -0.44
CALCA-204ENST00000469608 PCGF2P35227 344 aa12.33□□□□□ -0.44
CALCA-204ENST00000469608 EFNA4P52798 201 aa12.33□□□□□ -0.44
CALCA-204ENST00000469608 PUDPQ08623 228 aa12.33□□□□□ -0.44
CALCA-204ENST00000469608 SF3A3Q12874 501 aaKnown RBP eCLIP12.33□□□□□ -0.44
CALCA-204ENST00000469608 NPTX1Q15818 432 aa12.33□□□□□ -0.44
CALCA-204ENST00000469608 DUSP7Q16829 419 aa12.33□□□□□ -0.44
CALCA-204ENST00000469608 MS4A18Q3C1V0 323 aa12.33□□□□□ -0.44
CALCA-204ENST00000469608 PHYHD1Q5SRE7 291 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms