RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ZNF248Q8NDW4 579 aa11.35□□□□□ -0.59
USP11-206ENST00000469080 OR52E4Q8NGH9 312 aa11.35□□□□□ -0.59
USP11-206ENST00000469080 OR2I1PQ8NGU4 316 aa11.35□□□□□ -0.59
USP11-206ENST00000469080 LMF1Q96S06 567 aa11.35□□□□□ -0.59
USP11-206ENST00000469080 SUCNR1Q9BXA5 334 aa11.35□□□□□ -0.59
USP11-206ENST00000469080 SAP130Q9H0E3 1048 aa11.35□□□□□ -0.59
USP11-206ENST00000469080 BTBD17A6NE02 478 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 SOCS6O14544 535 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 DOK2O60496 412 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 ICOSLGO75144 302 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 RPP14O95059 124 aaKnown RBP11.34□□□□□ -0.59
USP11-206ENST00000469080 CT62P0C5K7 136 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 PEPDP12955 493 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 OSMP13725 252 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 DRD2P14416 443 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 DRD1P21728 446 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 LTBRP36941 435 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 GNALP38405 381 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 PPA1Q15181 289 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 MAPK14Q16539 360 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 AADACL4Q5VUY2 407 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 OR56A1Q8NGH5 318 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 ZNF563Q8TA94 476 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 RNFT2Q96EX2 444 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 ARL6Q9H0F7 186 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 TREM2Q9NZC2 230 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 LHX6Q9UPM6 363 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 A0A1B0GW55 424 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 C17orf51A8MQB3 221 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 RAD1O60671 282 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 MED6O75586 246 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 RP2O75695 350 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 SERPINA3P01011 423 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 DUX4L2P0CJ85 424 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 DUX4L3P0CJ86 424 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 DUX4L4P0CJ87 422 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 DUX4L5P0CJ88 424 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 DUX4L6P0CJ89 424 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 DUX4L7P0CJ90 424 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 CLUP10909 449 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 RPS27P42677 84 aaKnown RBP11.34□□□□□ -0.59
USP11-206ENST00000469080 GIPRP48546 466 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 PPT1P50897 306 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 RPS15AP62244 130 aaKnown RBP11.34□□□□□ -0.59
USP11-206ENST00000469080 SSPNQ14714 243 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 SPHARQ15513 63 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 ZIC1Q15915 447 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 SSX1Q16384 188 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 PGBD2Q6P3X8 592 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 KLBQ86Z14 1044 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 PUSL1Q8N0Z8 303 aaKnown RBP11.34□□□□□ -0.59
USP11-206ENST00000469080 OR52L1Q8NGH7 329 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 OR4K13Q8NH42 304 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 TCTEX1D2Q8WW35 142 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 C11orf24Q96F05 449 aaPredicted RBP11.34□□□□□ -0.59
USP11-206ENST00000469080 DUX4Q9UBX2 424 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 ICE1Q9Y2F5 2266 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 MPDZO75970 2070 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 J3QLW9 94 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 GPR171O14626 319 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 SPDEFO95238 335 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 HLA-DQA2P01906 255 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 ZNF19P17023 458 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 SOX18P35713 384 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 C16orf47Q6ZP98 133 aaPredicted RBP11.34□□□□□ -0.59
USP11-206ENST00000469080 ZNF367Q7RTV3 350 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 OR13C2Q8NGS9 318 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 SUN3Q8TAQ9 357 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 SCARB1Q8WTV0 552 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 SLC41A3Q96GZ6 507 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 ZC3HAV1LQ96H79 300 aaKnown RBP11.34□□□□□ -0.59
USP11-206ENST00000469080 FN3KQ9H479 309 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 NT5DC2Q9H857 520 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 NANSQ9NR45 359 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 ZFHX2Q9C0A1 2572 aaPredicted RBP11.34□□□□□ -0.59
USP11-206ENST00000469080 ROS1P08922 2347 aa11.34□□□□□ -0.59
USP11-206ENST00000469080 A0A0A6YYD5 115 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 A0A1B0GVI7 797 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 C11orf98E9PRG8 122 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 IL33O95760 270 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 ST3GAL3Q11203 375 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 NTRK2Q16620 822 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 CMIPQ8IY22 773 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 CNOT9Q92600 299 aaKnown RBP11.33□□□□□ -0.6
USP11-206ENST00000469080 SOX7Q9BT81 388 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 ACTRT3Q9BYD9 372 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 AP1M2Q9Y6Q5 423 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 CDC40O60508 579 aaKnown RBP eCLIP11.33□□□□□ -0.6
USP11-206ENST00000469080 PLGP00747 810 aaPredicted RBP11.33□□□□□ -0.6
USP11-206ENST00000469080 SLC1A3P43003 542 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 TNFRSF4P43489 277 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 TMEM35AQ53FP2 167 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 LAPTM4BQ86VI4 370 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 TMEM17Q86X19 198 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 GPR135Q8IZ08 494 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 SLC22A18ASQ8N1D0 253 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 POC1BQ8TC44 478 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 SLAMF9Q96A28 289 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 OPN3Q9H1Y3 402 aaPredicted RBP11.33□□□□□ -0.6
USP11-206ENST00000469080 DAPP1Q9UN19 280 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms